Gene detail information of Glyur000349s00021098 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G19370.1 | 1.00E-27 | Protein of unknown function (DUF1218) |
| NR | XP_004512332.1 | 6.01E-91 | PREDICTED: uncharacterized protein LOC101491510 [Cicer arietinum] |
| trEMBL | tr|G7K420|G7K420_MEDTR | 8.00E-85 | Transmembrane protein, putative {ECO:0000313|EMBL:AES95452.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00349 | 71957 | 73423 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000349s00021098.1 | PF06749.7 | DUF1218 | 104 | 198 | 5.50E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.799 |
| SRR1783600 | control | 0.856 |
| SRR1783602 | moderate drought stress | 1.357 |
| SRR1811619 | moderate drought stress | 1.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.449 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.584 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.104 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.171 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.166 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.410 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.556 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.571 |
| SRR2868004 | Drought Stress (root) | 11.079 |
| SRR2967015 | Control (root) | 7.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.745 |
| SRR9715740 | Leaf | 1.495 |
| SRR9715741 | Leaf | 0.826 |
| SRR9715739 | Root | 0.192 |
| SRR9715742 | Root | 1.276 |
| SRR9715743 | Root | 1.659 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.525 |
| SRR8749028 | MeJA induced 9h | 11.758 |
| SRR8749029 | MeJA induced 9h | 19.533 |
| SRR8749030 | Uninduced | 22.659 |
| SRR8749031 | Uninduced | 75.125 |
| SRR8749032 | Uninduced | 77.355 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.776 |
| SRR8400027 | Control - Root | 7.521 |