Gene detail information of Glyur000349s00021093 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G45310.1 | 2.00E-46 | |
| NR | XP_006587665.1 | 5.45E-140 | PREDICTED: uncharacterized protein LOC100787149 isoform X1 [Glycine max] |
| trEMBL | tr|K7LFB8|K7LFB8_SOYBN | 2.00E-140 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G35170.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00349 | 22161 | 27080 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.231 |
| SRR1783600 | control | 5.249 |
| SRR1783602 | moderate drought stress | 5.583 |
| SRR1811619 | moderate drought stress | 5.733 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.046 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.976 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.872 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.987 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.206 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.732 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.833 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.920 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.127 |
| SRR2868004 | Drought Stress (root) | 2.206 |
| SRR2967015 | Control (root) | 3.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.464 |
| SRR9715740 | Leaf | 0.507 |
| SRR9715741 | Leaf | 0.350 |
| SRR9715739 | Root | 3.583 |
| SRR9715742 | Root | 2.729 |
| SRR9715743 | Root | 2.701 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.648 |
| SRR8749028 | MeJA induced 9h | 1.588 |
| SRR8749029 | MeJA induced 9h | 1.697 |
| SRR8749030 | Uninduced | 0.636 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.248 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.329 |
| SRR8400027 | Control - Root | 1.957 |