Gene detail information of Glyur000348s00020031 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14830.1 | 5.00E-25 | |
| NR | KEH42637.1 | 9.78E-78 | heat shock 22 kDa protein, putative [Medicago truncatula] |
| trEMBL | tr|A0A072VLB5|A0A072VLB5_MEDTR | 4.00E-78 | Heat shock 22 kDa protein, putative {ECO:0000313|EMBL:KEH42637.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00348 | 64427 | 64906 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.761 |
| SRR1783600 | control | 11.916 |
| SRR1783602 | moderate drought stress | 23.958 |
| SRR1811619 | moderate drought stress | 23.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 44.236 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.137 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 30.271 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.487 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.996 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.287 |
| SRR2868004 | Drought Stress (root) | 32.806 |
| SRR2967015 | Control (root) | 34.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.807 |
| SRR9715740 | Leaf | 4.018 |
| SRR9715741 | Leaf | 8.707 |
| SRR9715739 | Root | 28.909 |
| SRR9715742 | Root | 66.533 |
| SRR9715743 | Root | 59.735 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.218 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.359 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.799 |
| SRR8400027 | Control - Root | 11.813 |