Gene detail information of Glyur000348s00020030 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G02715.1 | 2.00E-18 | |
| NR | XP_004495188.1 | 1.80E-73 | PREDICTED: uncharacterized protein LOC101500946 isoform X1 [Cicer arietinum] |
| trEMBL | tr|V7BJC1|V7BJC1_PHAVU | 3.00E-69 | Uncharacterized protein {ECO:0000313|EMBL:ESW16641.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00348 | 57878 | 58712 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.672 |
| SRR1783600 | control | 22.692 |
| SRR1783602 | moderate drought stress | 27.566 |
| SRR1811619 | moderate drought stress | 27.376 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.060 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.800 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.653 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.030 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.329 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.697 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.509 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.423 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.541 |
| SRR2868004 | Drought Stress (root) | 24.281 |
| SRR2967015 | Control (root) | 32.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.914 |
| SRR9715740 | Leaf | 10.803 |
| SRR9715741 | Leaf | 9.969 |
| SRR9715739 | Root | 15.957 |
| SRR9715742 | Root | 14.725 |
| SRR9715743 | Root | 17.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.939 |
| SRR8749028 | MeJA induced 9h | 4.603 |
| SRR8749029 | MeJA induced 9h | 2.284 |
| SRR8749030 | Uninduced | 2.514 |
| SRR8749031 | Uninduced | 2.469 |
| SRR8749032 | Uninduced | 0.801 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 37.799 |
| SRR8400027 | Control - Root | 29.090 |