Gene detail information of Glyur000348s00020027 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G48130.1 | 4.00E-11 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | KHN03811.1 | 4.85E-97 | Non-specific lipid-transfer protein-like protein [Glycine soja] |
| Swissprot | tr|Q9ZQI8|NLTL2_ARATH | 4.00E-15 | Non-specific lipid-transfer protein-like protein At2g13820 (Precursor) |
| trEMBL | tr|I1L857|I1L857_SOYBN | 2.00E-97 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G03360.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00348 | 44661 | 45545 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000348s00020027.1 | PF14368.1 | LTP_2 | 13 | 107 | 1.40E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 42.283 |
| SRR1783600 | control | 43.367 |
| SRR1783602 | moderate drought stress | 42.905 |
| SRR1811619 | moderate drought stress | 42.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.249 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.937 |
| SRR2868004 | Drought Stress (root) | 13.824 |
| SRR2967015 | Control (root) | 11.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.635 |
| SRR9715740 | Leaf | 0.431 |
| SRR9715741 | Leaf | 1.930 |
| SRR9715739 | Root | 55.837 |
| SRR9715742 | Root | 12.721 |
| SRR9715743 | Root | 19.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.645 |
| SRR8749031 | Uninduced | 2.031 |
| SRR8749032 | Uninduced | 0.250 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 159.977 |
| SRR8400027 | Control - Root | 138.197 |