Gene detail information of Glyur000348s00020026 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G48140.1 | 4.00E-18 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | XP_003590611.1 | 1.09E-58 | Non-specific lipid-transfer protein [Medicago truncatula] |
| trEMBL | tr|G7IDM6|G7IDM6_MEDTR | 4.00E-59 | Uncharacterized protein {ECO:0000313|EMBL:AFK34444.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00348 | 41508 | 43229 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000348s00020026.1 | PF14368.1 | LTP_2 | 4 | 81 | 4.10E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 116.188 |
| SRR1783600 | control | 117.148 |
| SRR1783602 | moderate drought stress | 107.504 |
| SRR1811619 | moderate drought stress | 106.105 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.235 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.233 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.362 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.258 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 129.167 |
| SRR2868004 | Drought Stress (root) | 68.339 |
| SRR2967015 | Control (root) | 45.864 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.188 |
| SRR9715739 | Root | 132.374 |
| SRR9715742 | Root | 19.378 |
| SRR9715743 | Root | 39.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.355 |
| SRR8749031 | Uninduced | 1.255 |
| SRR8749032 | Uninduced | 0.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 200.110 |
| SRR8400027 | Control - Root | 178.407 |