Gene detail information of Glyur000347s00029047


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G43970.11.00E-16translocase of outer membrane 22-V
NRKEH41163.15.56E-40translocase of outer membrane complex, subunit TOM22 [Medicago truncatula]
Swissprottr|Q9FNC9|TOM92_ARATH6.00E-27Mitochondrial import receptor subunit TOM9-2
trEMBLtr|A0A072VI87|A0A072VI87_MEDTR2.00E-40Translocase of outer membrane complex, subunit TOM22 {ECO:0000313|EMBL:KEH41163.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00347140706140966-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006886  intracellular protein transport


cellular_component

GO:0005741  mitochondrial outer membrane



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000347s00029047.1PF04281.8Tom2223759.30E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control234.474
SRR1783600control234.041
SRR1783602moderate drought stress221.504
SRR1811619moderate drought stress218.915

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain364.427
DRR006520Root Summer glycyrrhizin high producing strain357.835
DRR006521Root Winter glycyrrhizin high producing strain235.572
DRR006522Root Winter glycyrrhizin high producing strain228.090
DRR006523Root Summer glycyrrhizin low producing strain245.118
DRR006524Root Summer glycyrrhizin low producing strain253.169
DRR006525Leaf Summer glycyrrhizin high producing strain60.907
DRR006526Leaf Summer glycyrrhizin high producing strain62.297

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)273.315
SRR2868004Drought Stress (root)201.534
SRR2967015Control (root)213.678

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf69.285
SRR9715740Leaf89.336
SRR9715741Leaf58.635
SRR9715739Root456.559
SRR9715742Root231.378
SRR9715743Root273.159

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h106.728
SRR8749028MeJA induced 9h28.482
SRR8749029MeJA induced 9h60.564
SRR8749030Uninduced11.628
SRR8749031Uninduced1.326
SRR8749032Uninduced15.656

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root153.415
SRR8400027Control - Root166.970

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved