Gene detail information of Glyur000347s00029045 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G13330.1 | 1.00E-110 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | XP_004504344.1 | 0 | PREDICTED: uncharacterized protein LOC101512857 [Cicer arietinum] |
| trEMBL | tr|G7LHX1|G7LHX1_MEDTR | 0 | S-adenosyl-L-methionine-dependent methyltransferase superfamily protein {ECO:0000313|EMBL:AET04165.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00347 | 117333 | 120631 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.568 |
| SRR1783600 | control | 2.552 |
| SRR1783602 | moderate drought stress | 2.334 |
| SRR1811619 | moderate drought stress | 2.365 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.557 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.446 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.220 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.062 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.535 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.386 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.972 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.083 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.046 |
| SRR2868004 | Drought Stress (root) | 7.757 |
| SRR2967015 | Control (root) | 7.339 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.215 |
| SRR9715740 | Leaf | 2.910 |
| SRR9715741 | Leaf | 2.494 |
| SRR9715739 | Root | 4.831 |
| SRR9715742 | Root | 1.418 |
| SRR9715743 | Root | 2.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.949 |
| SRR8749028 | MeJA induced 9h | 6.830 |
| SRR8749029 | MeJA induced 9h | 7.838 |
| SRR8749030 | Uninduced | 4.283 |
| SRR8749031 | Uninduced | 8.645 |
| SRR8749032 | Uninduced | 5.817 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.954 |
| SRR8400027 | Control - Root | 7.403 |