Gene detail information of Glyur000347s00029043 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G33250.1 | 4.00E-15 | |
| NR | AES60426.2 | 2.02E-97 | transmembrane protein, putative [Medicago truncatula] |
| trEMBL | tr|G7I6P2|G7I6P2_MEDTR | 8.00E-98 | Transmembrane protein, putative {ECO:0000313|EMBL:AES60426.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00347 | 87624 | 92793 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.510 |
| SRR1783600 | control | 2.440 |
| SRR1783602 | moderate drought stress | 3.701 |
| SRR1811619 | moderate drought stress | 3.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.448 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.531 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.556 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.312 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.748 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.775 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.146 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.765 |
| SRR2868004 | Drought Stress (root) | 2.942 |
| SRR2967015 | Control (root) | 5.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.575 |
| SRR9715740 | Leaf | 40.164 |
| SRR9715741 | Leaf | 17.232 |
| SRR9715739 | Root | 0.282 |
| SRR9715742 | Root | 1.721 |
| SRR9715743 | Root | 1.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.965 |
| SRR8749028 | MeJA induced 9h | 1.641 |
| SRR8749029 | MeJA induced 9h | 0.979 |
| SRR8749030 | Uninduced | 0.486 |
| SRR8749031 | Uninduced | 0.120 |
| SRR8749032 | Uninduced | 0.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.200 |
| SRR8400027 | Control - Root | 3.373 |