Gene detail information of Glyur000347s00029041 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_008235757.1 | 8.41E-15 | PREDICTED: F-box/kelch-repeat protein At3g06240-like [Prunus mume] |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00347 | 67235 | 67777 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.857 |
| SRR1783600 | control | 5.512 |
| SRR1783602 | moderate drought stress | 6.935 |
| SRR1811619 | moderate drought stress | 6.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.750 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.997 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.665 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.551 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 42.554 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 45.424 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 96.168 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 89.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.102 |
| SRR2868004 | Drought Stress (root) | 0.505 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.192 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.504 |
| SRR8749030 | Uninduced | 0.254 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 8.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.032 |