Gene detail information of Glyur000346s00018172 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G48340.1 | 3.00E-98 | |
| NR | KEH20320.1 | 0 | hypothetical protein MTR_8g071270 [Medicago truncatula] |
| trEMBL | tr|A0A072U3C7|A0A072U3C7_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:KEH20320.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00346 | 31705 | 34255 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.654 |
| SRR1783600 | control | 2.687 |
| SRR1783602 | moderate drought stress | 3.604 |
| SRR1811619 | moderate drought stress | 3.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.218 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.772 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.093 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.447 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.121 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.557 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.514 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.406 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.481 |
| SRR2868004 | Drought Stress (root) | 16.760 |
| SRR2967015 | Control (root) | 16.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.137 |
| SRR9715740 | Leaf | 11.015 |
| SRR9715741 | Leaf | 8.869 |
| SRR9715739 | Root | 0.855 |
| SRR9715742 | Root | 5.783 |
| SRR9715743 | Root | 5.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.118 |
| SRR8749028 | MeJA induced 9h | 8.370 |
| SRR8749029 | MeJA induced 9h | 5.174 |
| SRR8749030 | Uninduced | 4.183 |
| SRR8749031 | Uninduced | 3.499 |
| SRR8749032 | Uninduced | 3.775 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.228 |
| SRR8400027 | Control - Root | 11.348 |