Gene detail information of Glyur000345s00015675 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003538737.1 | 1.07E-27 | PREDICTED: COPII coat assembly protein SEC16-like [Glycine max] |
| Swissprot | tr|Q9FGK9|MAG5_ARATH | 5.00E-16 | Protein transport protein SEC16A homolog {ECO:0000305} |
| trEMBL | tr|I1LGQ3|I1LGQ3_SOYBN | 4.00E-28 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G03590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00345 | 168297 | 170304 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.841 |
| SRR1783600 | control | 8.398 |
| SRR1783602 | moderate drought stress | 7.610 |
| SRR1811619 | moderate drought stress | 7.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.003 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.589 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.063 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.725 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.430 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.975 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.203 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.690 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.118 |
| SRR2868004 | Drought Stress (root) | 1.391 |
| SRR2967015 | Control (root) | 0.562 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.093 |
| SRR9715740 | Leaf | 0.598 |
| SRR9715741 | Leaf | 1.130 |
| SRR9715739 | Root | 0.115 |
| SRR9715742 | Root | 0.914 |
| SRR9715743 | Root | 0.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.452 |
| SRR8749028 | MeJA induced 9h | 0.592 |
| SRR8749029 | MeJA induced 9h | 0.928 |
| SRR8749030 | Uninduced | 1.618 |
| SRR8749031 | Uninduced | 0.824 |
| SRR8749032 | Uninduced | 2.080 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.418 |
| SRR8400027 | Control - Root | 0.601 |