Gene detail

Gene detail information of Glyur000344s00030067

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G52820.1	5.00E-44	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
NR	XP_003547720.1	7.68E-139	PREDICTED: probable inactive 2-oxoglutarate-dependent dioxygenase AOP2-like [Glycine max]
Swissprot	tr\|Q945B6\|AOP1L_ARATH	2.00E-44	Probable 2-oxoglutarate-dependent dioxygenase AOP1.2
trEMBL	tr\|I1MLV5\|I1MLV5_SOYBN	3.00E-139	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA16G07830.1}

Sequence

Transcript Sequence

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00344	75645	78308	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0016491 oxidoreductase activity

GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000344s00030067.1	PF14226.1	DIOX_N	9	90	5.20E-08
Glyur000344s00030067.1	PF03171.15	2OG-FeII_Oxy	127	202	5.40E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.815
SRR1783600	control	0.842
SRR1783602	moderate drought stress	0.148
SRR1811619	moderate drought stress	0.163

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.855
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.225

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	142.542
SRR2868004	Drought Stress (root)	216.138
SRR2967015	Control (root)	112.069

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.057
SRR9715740	Leaf	0.296
SRR9715741	Leaf	2.267
SRR9715739	Root	0.000
SRR9715742	Root	0.031
SRR9715743	Root	0.194

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.050
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	15.481
SRR8400027	Control - Root	10.222