Gene detail information of Glyur000342s00013743 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G10770.1 | 1.00E-77 | Eukaryotic aspartyl protease family protein |
| NR | XP_007147550.1 | 0 | hypothetical protein PHAVU_006G134200g [Phaseolus vulgaris] |
| Swissprot | tr|Q9LS40|ASPG1_ARATH | 2.00E-62 | Protein ASPARTIC PROTEASE IN GUARD CELL 1 (Precursor) |
| trEMBL | tr|V7BNH0|V7BNH0_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW19544.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00342 | 185548 | 188834 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000342s00013743.1 | PF14543.1 | TAXi_N | 187 | 364 | 6.10E-41 |
| Glyur000342s00013743.1 | PF14541.1 | TAXi_C | 388 | 536 | 9.90E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 34.748 |
| SRR1783600 | control | 33.941 |
| SRR1783602 | moderate drought stress | 35.737 |
| SRR1811619 | moderate drought stress | 35.278 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.092 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.459 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.420 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.985 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.756 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.925 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.079 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.908 |
| SRR2868004 | Drought Stress (root) | 6.261 |
| SRR2967015 | Control (root) | 7.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.707 |
| SRR9715740 | Leaf | 2.017 |
| SRR9715741 | Leaf | 2.296 |
| SRR9715739 | Root | 21.863 |
| SRR9715742 | Root | 18.541 |
| SRR9715743 | Root | 19.222 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.316 |
| SRR8749028 | MeJA induced 9h | 0.188 |
| SRR8749029 | MeJA induced 9h | 0.185 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.405 |
| SRR8400027 | Control - Root | 22.573 |