Gene detail

Gene detail information of Glyur000342s00013732

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G24250.1	5.00E-103	Seven transmembrane MLO family protein
NR	AES64675.2	0	seven transmembrane MLO family protein [Medicago truncatula]
Swissprot	tr\|Q94KB2\|MLO13_ARATH	3.00E-139	MLO-like protein 13
trEMBL	tr\|G7IFS4\|G7IFS4_MEDTR	0	MLO-like protein {ECO:0000256\|RuleBase:RU280816}

Sequence

Transcript Sequence

>Glyur000342s00013732.1
CTGACATCACGAGTATGAAACGAATTCTCTTTTTTTGTCACGATACTCGTGACCAGCACTTAAGAATCTGGTTCCACGTTTTATGCCAACTCAATTTGGCTGCGTATACCTTGATGCCAGGAAAAACATTCCTTGCTTGTGTGCTGGTATACATCAACTGTGCAGAATATCTTTTCCTTGACTCCTGTCACTTTCTGGCCAAAATATATATATTGAGCAGAAAAAAGAATTGTCCTCAATTCATCAATCTGCCAAACTGAATTGCTAACAAANCATGGCAGAAGAACTGAACCAGTCTCTGGAATATACACCAACATGGATTGTCGCAGTTGTTTGCTCCATCATTGTTTTAATCTCTCTCTGTGTTGAGCGTGCCCTTCACCGGCTTGGAAAGTACTTGAAGAGGGAAAAGAAGACTGCATTATATGATGCCTTGACAAAATTGGAAGAAGGTAGTTTCTTATAATTGATGCTTTTAGGGTTCATTTCCCTTCTATTAACCGTCTTTCAAGGTCTAATAAGCCACATTTGCATCACACCTAAGTATGCAACCCAAATGCTTCCATGCAAGAGGCCTCATGGGTCTTCAGAAGGTTCAGAGCATTATCAGATACACTATGATACTATAATCAACAGAAGAAGGCTTTTTTCTACAGACACTGGTTCACAGCATTGTGGACAAGAGGGGAAGGTTCCACTGTTATCACTGGAATCAGTGCACCATCTTCACATTTTCATCTTTGTGTTGGCCATTGTACATGCATTATTCTGTGTCACCACAGTGATTCTTGGAGGCGCAAGGATCCACCAGTGGAAAAGGTGGGAGGATCATGCTAGGCAGAAGATAAATTCCAATGAGGGTGAAACTCTTAAAAGAGATATAGATGAGTTCTTCAACAAACATGCTNAGGGATATTGGAGAAAAGCAGCTGTTGTTGGTTGGCTGAGATCATTCTTCAAGCAATTTTATGGATCTATCACAAAATATGACTACCTTGCACTGCGGCATGGATTTATTGAGAAACACCACCGAAACAAACCCGATTATGATTTTCACAAGTACATGTGGCGGACACTTGAAATCGACTTCAGAAAAGTTATAGGCATAAGCTGGTACCTGTGGCTCTTTGTTGTGCTGTATTTGCTGTTGAATCTTGAAGTTTACAATGCAGGGTGGCATACTTATTTTTGGTTAGCCTTTTTACCTTTGATACTTCTACTTCTTGTGGGGGCAAAGTTGGAGCACATAATCACTCGTTTGGGCCAGGACTCAGTAGCAGACACTCAAATGAAGCCATCAGATGAATACTTTTGGTTCGGCCGCCCAGGCGTTGTCCTGCACTTACTTCACTTCACCGTGTTTCAGAACTCTTTCGAGATTGCATTTTTATTCTGGATTTGGGTGATTTGCATATATGGATTTGATTCATGCATTGCGGATAAAATCGCCTTCGTGATCCCAAGACTTATAATGGGTGCAATTGTTCAAGTGCTTTGCAGTTACAGCACCTTGCCACTGTACACTCTTGTGACTCAGATGGGTAGCAGGTGCAAGATTGACAAGATTGATANTGTGGTGGAGTCATCTCCCTTGATCAGGGTTGAAGGTAATTCCCCTCCTACGACCATGTCCCACAGAATGACCAAAGAATCAAACCAACNCCCTCAAATTGGTGAACAAGCAATTATCATGATGGAAGATCATGCAGTATCATCTACAATTGAGCTTCCCTGCATTGTCCAATCTCCTTTGGAGAGACCTAATGCATTCAATACTCATTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00342	128342	133851	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006952 defense response

cellular_component
GO:0016021 integral component of membrane

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000342s00013732.1	PF03094.10	Mlo	1	371	2.90E-140
Glyur000342s00013732.2	PF03094.10	Mlo	1	367	5.60E-143

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.352
SRR1783600	control	0.367
SRR1783602	moderate drought stress	0.330
SRR1811619	moderate drought stress	0.346

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.822
DRR006520	Root Summer glycyrrhizin high producing strain	0.705
DRR006521	Root Winter glycyrrhizin high producing strain	2.295
DRR006522	Root Winter glycyrrhizin high producing strain	2.091
DRR006523	Root Summer glycyrrhizin low producing strain	1.514
DRR006524	Root Summer glycyrrhizin low producing strain	1.411
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.992
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.257

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.682
SRR2868004	Drought Stress (root)	2.301
SRR2967015	Control (root)	2.295

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.823
SRR9715740	Leaf	2.141
SRR9715741	Leaf	2.118
SRR9715739	Root	0.000
SRR9715742	Root	0.668
SRR9715743	Root	0.423

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.253
SRR8749028	MeJA induced 9h	0.247
SRR8749029	MeJA induced 9h	0.746
SRR8749030	Uninduced	0.575
SRR8749031	Uninduced	0.290
SRR8749032	Uninduced	0.809

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.313
SRR8400027	Control - Root	0.946