Gene detail information of Glyur000342s00013726 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003534756.2 | 2.38E-137 | PREDICTED: uncharacterized protein LOC100781827 [Glycine max] |
| COG | YP_005446449.1 | 1.00E-21 | hypothetical protein PSMK_23930 [Phycisphaera mikurensis NBRC 102666] |
| trEMBL | tr|I1L092|I1L092_SOYBN | 9.00E-138 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G02180.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00342 | 103406 | 106592 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000342s00013726.1 | PF00730.20 | HhH-GPD | 292 | 398 | 0.00012 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.363 |
| SRR1783600 | control | 17.904 |
| SRR1783602 | moderate drought stress | 15.877 |
| SRR1811619 | moderate drought stress | 15.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.123 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.913 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.619 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.157 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.134 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.511 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.697 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.645 |
| SRR2868004 | Drought Stress (root) | 33.805 |
| SRR2967015 | Control (root) | 30.540 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.986 |
| SRR9715740 | Leaf | 26.314 |
| SRR9715741 | Leaf | 33.312 |
| SRR9715739 | Root | 13.581 |
| SRR9715742 | Root | 36.391 |
| SRR9715743 | Root | 30.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.708 |
| SRR8749028 | MeJA induced 9h | 7.347 |
| SRR8749029 | MeJA induced 9h | 6.888 |
| SRR8749030 | Uninduced | 7.097 |
| SRR8749031 | Uninduced | 6.885 |
| SRR8749032 | Uninduced | 8.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 64.824 |
| SRR8400027 | Control - Root | 69.636 |