Gene detail information of Glyur000341s00020153 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G35490.1 | 5.00E-76 | Plastid-lipid associated protein PAP / fibrillin family protein |
| NR | XP_004512496.1 | 0 | PREDICTED: plastoglobulin-1, chloroplastic-like [Cicer arietinum] |
| Swissprot | tr|Q9ZP40|PG1_PEA | 0 | Plastoglobulin-1, chloroplastic (Precursor) |
| trEMBL | tr|I1J4S3|I1J4S3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G01910.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00341 | 168353 | 171336 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000341s00020153.1 | PF04755.7 | PAP_fibrillin | 133 | 348 | 3.20E-72 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 63.806 |
| SRR1783600 | control | 63.813 |
| SRR1783602 | moderate drought stress | 62.523 |
| SRR1811619 | moderate drought stress | 62.129 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 61.484 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 60.921 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 44.853 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 43.981 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 50.922 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 51.602 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 198.393 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 198.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 46.082 |
| SRR2868004 | Drought Stress (root) | 46.781 |
| SRR2967015 | Control (root) | 42.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 219.440 |
| SRR9715740 | Leaf | 305.688 |
| SRR9715741 | Leaf | 225.911 |
| SRR9715739 | Root | 60.473 |
| SRR9715742 | Root | 64.394 |
| SRR9715743 | Root | 67.643 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 42.922 |
| SRR8749028 | MeJA induced 9h | 46.569 |
| SRR8749029 | MeJA induced 9h | 42.710 |
| SRR8749030 | Uninduced | 50.848 |
| SRR8749031 | Uninduced | 35.305 |
| SRR8749032 | Uninduced | 46.779 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 75.621 |
| SRR8400027 | Control - Root | 71.826 |