Gene detail information of Glyur000341s00020146 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G32310.1 | 1.00E-21 | |
| NR | AFK33692.1 | 1.63E-40 | unknown [Lotus japonicus] |
| trEMBL | tr|I3S0A0|I3S0A0_LOTJA | 6.00E-41 | Uncharacterized protein {ECO:0000313|EMBL:AFK33692.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00341 | 130828 | 132119 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.360 |
| SRR1783600 | control | 23.061 |
| SRR1783602 | moderate drought stress | 25.535 |
| SRR1811619 | moderate drought stress | 25.109 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.187 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.204 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.193 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.825 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.053 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.372 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.698 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.519 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.435 |
| SRR2868004 | Drought Stress (root) | 24.261 |
| SRR2967015 | Control (root) | 25.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.344 |
| SRR9715740 | Leaf | 14.400 |
| SRR9715741 | Leaf | 11.312 |
| SRR9715739 | Root | 19.926 |
| SRR9715742 | Root | 18.705 |
| SRR9715743 | Root | 21.555 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 22.588 |
| SRR8749028 | MeJA induced 9h | 10.512 |
| SRR8749029 | MeJA induced 9h | 13.951 |
| SRR8749030 | Uninduced | 4.302 |
| SRR8749031 | Uninduced | 1.911 |
| SRR8749032 | Uninduced | 5.657 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 35.326 |
| SRR8400027 | Control - Root | 41.092 |