Gene detail information of Glyur000340s00024357 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G25010.1 | 8.00E-11 | Aminotransferase-like, plant mobile domain family protein |
| NR | XP_004516383.1 | 1.80E-32 | PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cicer arietinum] |
| Swissprot | tr|Q9LNG5|PPP7L_ARATH | 2.00E-06 | Serine/threonine-protein phosphatase 7 long form homolog |
| trEMBL | tr|V7B7L8|V7B7L8_PHAVU | 5.00E-26 | Uncharacterized protein {ECO:0000313|EMBL:ESW12848.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00340 | 5734 | 7174 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000340s00024357.1 | PF10536.4 | PMD | 76 | 123 | 4.00E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.092 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.091 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.304 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.213 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 73.930 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 73.828 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.036 |
| SRR2868004 | Drought Stress (root) | 0.140 |
| SRR2967015 | Control (root) | 0.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.400 |
| SRR9715740 | Leaf | 1.514 |
| SRR9715741 | Leaf | 4.547 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.673 |
| SRR8749028 | MeJA induced 9h | 0.166 |
| SRR8749029 | MeJA induced 9h | 0.104 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.032 |
| SRR8749032 | Uninduced | 0.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.028 |
| SRR8400027 | Control - Root | 0.021 |