Gene detail information of Glyur000339s00020820 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003637876.1 | 2.14E-40 | hypothetical protein MTR_104s0007 [Medicago truncatula] |
| trEMBL | tr|G8A0M6|G8A0M6_MEDTR | 8.00E-41 | Uncharacterized protein {ECO:0000313|EMBL:KEH27158.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00339 | 170231 | 172794 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.091 |
| SRR1783600 | control | 2.931 |
| SRR1783602 | moderate drought stress | 2.678 |
| SRR1811619 | moderate drought stress | 2.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.511 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.327 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.443 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.022 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.186 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.167 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.115 |
| SRR2868004 | Drought Stress (root) | 6.774 |
| SRR2967015 | Control (root) | 10.262 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 1.090 |
| SRR9715742 | Root | 3.875 |
| SRR9715743 | Root | 3.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.132 |
| SRR8749028 | MeJA induced 9h | 0.143 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.032 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.295 |
| SRR8400027 | Control - Root | 3.645 |