Gene detail information of Glyur000339s00020818 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G28830.1 | 2.00E-64 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | AES59951.2 | 4.67E-121 | S-adenosylmethionine-dependent methyltransferase [Medicago truncatula] |
| COG | NP_987805.1 | 5.00E-30 | N-6 adenine-specific DNA methylase [Methanococcus maripaludis S2] |
| trEMBL | tr|G7IA40|G7IA40_MEDTR | 2.00E-121 | S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:AES59951.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00339 | 160103 | 164545 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000339s00020818.1 | PF13659.1 | Methyltransf_26 | 31 | 128 | 6.50E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.275 |
| SRR1783600 | control | 11.400 |
| SRR1783602 | moderate drought stress | 13.545 |
| SRR1811619 | moderate drought stress | 13.152 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.791 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.113 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.230 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.636 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.739 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.684 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.481 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.069 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.381 |
| SRR2868004 | Drought Stress (root) | 14.711 |
| SRR2967015 | Control (root) | 10.761 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.318 |
| SRR9715740 | Leaf | 10.940 |
| SRR9715741 | Leaf | 8.211 |
| SRR9715739 | Root | 15.078 |
| SRR9715742 | Root | 15.393 |
| SRR9715743 | Root | 15.601 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.621 |
| SRR8749028 | MeJA induced 9h | 9.748 |
| SRR8749029 | MeJA induced 9h | 13.459 |
| SRR8749030 | Uninduced | 5.351 |
| SRR8749031 | Uninduced | 1.867 |
| SRR8749032 | Uninduced | 3.353 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.517 |
| SRR8400027 | Control - Root | 18.704 |