Gene detail information of Glyur000339s00020798 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11590.1 | 3.00E-30 | Integrase-type DNA-binding superfamily protein |
| NR | XP_003533400.1 | 6.39E-81 | PREDICTED: ethylene-responsive transcription factor ERF036-like [Glycine max] |
| Swissprot | tr|Q9LYD3|DREB3_ARATH | 1.00E-56 | Dehydration-responsive element-binding protein 3 |
| trEMBL | tr|K7LEV4|K7LEV4_SOYBN | 2.00E-81 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G32730.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00339 | 20721 | 21413 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000339s00020798.1 | PF00847.15 | AP2 | 57 | 107 | 1.90E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.012 |
| SRR1783600 | control | 6.156 |
| SRR1783602 | moderate drought stress | 15.253 |
| SRR1811619 | moderate drought stress | 15.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 34.519 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 35.099 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.161 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 64.491 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 66.834 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.321 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.441 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.978 |
| SRR2868004 | Drought Stress (root) | 9.614 |
| SRR2967015 | Control (root) | 23.944 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.861 |
| SRR9715740 | Leaf | 2.271 |
| SRR9715741 | Leaf | 0.647 |
| SRR9715739 | Root | 55.715 |
| SRR9715742 | Root | 77.693 |
| SRR9715743 | Root | 71.682 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.077 |
| SRR8749028 | MeJA induced 9h | 2.307 |
| SRR8749029 | MeJA induced 9h | 0.753 |
| SRR8749030 | Uninduced | 0.623 |
| SRR8749031 | Uninduced | 0.266 |
| SRR8749032 | Uninduced | 0.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.452 |
| SRR8400027 | Control - Root | 45.962 |