Gene detail information of Glyur000338s00015582 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G24080.2 | 3.00E-70 | KRR1 family protein |
| NR | XP_007147473.1 | 0 | hypothetical protein PHAVU_006G127600g [Phaseolus vulgaris] |
| trEMBL | tr|V7BND7|V7BND7_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW19467.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00338 | 167305 | 169326 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000338s00015582.1 | PF05178.7 | Kri1 | 349 | 456 | 2.80E-20 |
| Glyur000338s00015582.1 | PF12936.2 | Kri1_C | 511 | 596 | 3.80E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.570 |
| SRR1783600 | control | 4.500 |
| SRR1783602 | moderate drought stress | 4.044 |
| SRR1811619 | moderate drought stress | 4.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.394 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.173 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.386 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.349 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.697 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.771 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.706 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.681 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.732 |
| SRR2868004 | Drought Stress (root) | 6.251 |
| SRR2967015 | Control (root) | 6.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.938 |
| SRR9715740 | Leaf | 2.586 |
| SRR9715741 | Leaf | 2.668 |
| SRR9715739 | Root | 0.276 |
| SRR9715742 | Root | 1.901 |
| SRR9715743 | Root | 2.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.185 |
| SRR8749028 | MeJA induced 9h | 13.697 |
| SRR8749029 | MeJA induced 9h | 9.973 |
| SRR8749030 | Uninduced | 8.683 |
| SRR8749031 | Uninduced | 5.980 |
| SRR8749032 | Uninduced | 3.279 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.181 |
| SRR8400027 | Control - Root | 5.789 |