Gene detail

Gene detail information of Glyur000338s00015568.1

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G34710.1	Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
NR	XP_003546255.1	PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Glycine max]
Swissprot	tr\|O04291\|ATB14_ARATH	Homeobox-leucine zipper protein ATHB-14
trEMBL	tr\|I1MG30\|I1MG30_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA15G13640.1}

Sequence

Transcript Sequence

>Glyur000338s00015568.1
GTTCCATCTCTTTCTGTGGGTGACTTCTCTCTCTTTTTCTTCCTTCTCTCTCGAGATTGGTGTGTCTGTGCGAGATAAAACCACCGTATACCCTTTCCCCTATAGCTCTCTTCTCTAACTTGTGATTTTGAGGGAACTCAGCAGCGTCTAATGAAGGAGAGTGTAGGCTCTCTTGGTGAAGAGAGCCTGCCCGTGACTAACAACAACAATAGCACCAGCACCAGCACCAGCGAAGAAGAAGAGCCAAACTAGCTCTTTCCTTCTCAGTCTTGTAGTTTTGGTATTTGTGGGGTTGTGCATGAGATGGCACTTTCTATGCAGCACCACAAGGACTCATCCAGCAACAACAACCAGATGGATAGCAGCAAGTATGTGAGGTACACACCTGAGCAGGTGGAGGCTTTGGAGAGGGTCTATGCTGAATGCCCAAAGCCCAGTTCTCTGCGGAGGCAGCAACTCATCAGGGAATGCCCCATCCTCTCCAACATTGAACCCAAACAGATCAAAGTTTGGTTTCAAAACCGCAGGTGTCGTGAGAAGCAAAGGAAGGAAGCTTCTCGTCTGCAGACGGTGAATAGGAAGCTGACTGCGATGAACAAGCTGTTAATGGAAGAGAATGACCGTCTGCAGAAGCAGGTCTCACATCTGGTCTATGAAAATGGATATATGAAACAACAGATACAGACTGCATCTGCTGCTACCACCACAGACAATAGCTGTGAGTCTGTGACCCTGGCAGAGTTCCTATCCAAGGCTACCGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTTGCTGTTTCCCGCAACTGTAGTGGGGTAGCAGCACGAGCCTGTGGCCTCGTGAGTCTAGAGCCCACGAAGGTTGCCGAGATTCTTAAAGATCGTCTGTCATGGTATCGTGACTGCCGATGCCTCGATGTGTTAAGTATAGTCCCCGCTGGGAATGGGGGCACCATAGAGCTCATGTACATGCAGACTTATGCGCCTACAACATTGGCTGCAGCGCGGGACTTTTGGACACTGAGATACACTACTAGCTTGGAAGATGGAAGTCTTGTGATATGTGAGAGATCATTGACCTCTTCAACTGGTGGTCCCACTGGGCCTCCTCCTTCAAACTTTGTGAGAGCTGAAATGCTTCCTAGTGGTTTTCTGATTAGACCATGTGAGGGTGGTGGATCCATTATTCACATTGTTGATCATATTGATTTAGATGTCTGGAGTGTCCCTGAAGTACTGAGGCCCCTCTATGAATCATCAAAAATCTTGGCTCAGAAATTGACTATTGCTGCCTTGCAACACATAAGACAGATAGCACAAGAATCAAGTGGAGAAATTCAGTATGGCGGGGGACGTCAACCTGCTGTCTTGAGGACATTTAGTCAGAGACTTTGCAGGGGGTTCAATGATGCTGTTAATGGATTTGTTGATGATGGTTGGTCACTGATGGGAAATGATGGGGTGGAAGATGTGACTATAGCCATAAACTCATCTCCTAACAAGTTTTTGGGGTCCAATTACAATTCATCAATGTTCCCAGCATTTGGAGGTGGGGTGTTGTGTGCCAAGGCATCGATGCTGCTGCAGAATGTTCCTCCTGCTTTGCTTGTTCGGTTTTTGAGGGAGCATCGATCAGAGTGGGCTGACTATGGAGTTGATGCATACTCTGCTGCTTGCCTCAAGGCTAGCCCCTATGCAGTTCCCTGTGCAAGACCTGGTGGCTTCCCCAGCAGCCAGGTCATTTTACCCCTTGCTCATACTATTGAGCACGAGGAGTTCCTGGAGGTAGTTCGTATAGAGGGTCATGCATTTTCCCCTGAAGATGTTGCATTGGCACGTGATATGTATCTATTGCAGCTGTGCAGTGGAGTTGATGAAAATGCAATCGGGGCATGTGCTCAACTTGTGTTTGCACCTATTGATGAATCATTTGCAGATGATGCTCTTTTGCTGCCTTCTGGTTTTCGTGTCATTCCATTGGATCCTAAAACAGATGGTCCAGCCGCAACTAGGACATTGGATTTGGCATCAACACTTGAAGTGGGATCCGGTAATGCTCGTCCAGCTGGTGAAGCTGATGGTTACAATCTTAGGTCTGTCCTTACTATTGCATTTCAATTCACCTTTGAGAATCATATGCGGGACAATGTGGCTGCTATGGCTCGCCAGTATGTGCGTAGTGTTGTGGGATCAGTTCAGCGGGTTGCCATGGCAATTGCTCCTTCTCGGCTCAATACCCAGCTGGGGCCAAAGTCACTTCCTGGTTCACCAGAGGCTGTTTCTTTAGCACGATGGATATGTAGAAGCTACAGGTTGCACACTGGTGCTGAGCTTTTTAGAGTTGAGTCCCCAGCTGGAGATGCAATCTTGAAGCAACTTTGGCACCATTCTGATGCAATCATGTGCTGTTCTGTGAAAACAAATGCATCTCCAGTGTTCACTTTTGCAAACCAGGCTGGACTAGACATGCTTGAAACTACTCTAGTTGCTCTTCAAGATATAATGCTTGATAAAGTGCTAGATGAAGCTGGAAGGAAGATTCTCTGCTGTGAGTTCTCCAAGATAATGCAACAGGGTTTTGCATATCTGCCAGCAGGGATATGTGTGTCCAGTATGAATAGGCCAGTGTCCTATGAGCAGGCCATTGCATGGAAAGTTCTCAATGATGATGATTCCAATCACTGCCTCGCCTTCATGTTCGTGAACTGGTCTTTTGTCTGATCGTCCATCATCAAGATACTTAAATATAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00338	78863	88447	-

Gene family

Gene family	subfamily
Transcription Factors Family	HB

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0003677 DNA binding

GO:0008289 lipid binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000338s00015568.1	PF00046.24	Homeobox	22	80	3.60E-16
Glyur000338s00015568.1	PF01852.14	START	144	346	4.30E-49
Glyur000338s00015568.1	PF08670.6	MEKHLA	667	816	3.80E-62

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.272
SRR1783600	control	3.475
SRR1783602	moderate drought stress	3.019
SRR1811619	moderate drought stress	3.061

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.965
DRR006520	Root Summer glycyrrhizin high producing strain	8.735
DRR006521	Root Winter glycyrrhizin high producing strain	0.563
DRR006522	Root Winter glycyrrhizin high producing strain	0.550
DRR006523	Root Summer glycyrrhizin low producing strain	8.906
DRR006524	Root Summer glycyrrhizin low producing strain	9.165
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.510
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.509

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	46.165
SRR2868004	Drought Stress (root)	43.783
SRR2967015	Control (root)	44.717

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.035
SRR9715740	Leaf	3.202
SRR9715741	Leaf	1.641
SRR9715739	Root	8.128
SRR9715742	Root	17.959
SRR9715743	Root	15.898

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.204
SRR8749028	MeJA induced 9h	0.034
SRR8749029	MeJA induced 9h	0.201
SRR8749030	Uninduced	0.048
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.103

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	31.632
SRR8400027	Control - Root	43.686