Gene detail

Gene detail information of Glyur000337s00026867

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G16540.1	5.00E-126	molybdenum cofactor sulfurase (LOS5) (ABA3)
NR	XP_003534435.1	0	PREDICTED: molybdenum cofactor sulfurase-like isoform X1 [Glycine max]
COG	NP_616873.1	3.00E-48	hypothetical protein MA1950 [Methanosarcina acetivorans C2A]
Swissprot	tr\|Q9C5X8\|MOCOS_ARATH	3.00E-154	Molybdenum cofactor sulfurase {ECO:0000255\|HAMAP-Rule:MF_03050}
trEMBL	tr\|K7LB27\|K7LB27_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G00460.6}

Sequence

Transcript Sequence

>Glyur000337s00026867.1
ATGGCCGCCGCCAAGGAAGAATTCCTCAAAGAGTTCGGTGAACATTACGGGTATCCTAACGGCCCCAAGTCCATTGATCAAATTCGAGCTACCGAATTCAAGAGATTGCAAGTACTAGATAGCCAAAGTGACTCCAGTTCTGCAACTCTTGATATTGTGAAGGATGCTCGCCAGCAGAAAATTCTACATTTTGCACAGATTATTAAACTATCAGTCATACAGGTTCTTGACTACTGCAATGCATCTCCCAAAGACTATAAATGTATATTTACCTCGGGGGCAACAGCAGCATTGAAGCTGGTTGGAGAGGCTTTTCCATGGAGTTGTAACAGTAGTTTTATGTATACAATGGAGAATCATAACAGTGTTCTTGGTATAAGAGAATATGCTCTTGGTCAAGGAGCTGCGGCCATTGCAGTAGATATTGAAGATGTACATCCTAGAATAACAGGTGAAAAAGTTTCTCCAAAGATATCACTGCACCAAGTACAAAGAAGAAAAGTGGCTGGATTGCTGGAGGGAGAGCCAATGGGTGATGTGTATAATTTGTTTGCCTTTCCCTCAGAGTGCAATTTCTCTGGGTTGAGATTCGGCCTTGACTTGGTGAAGATTATNAAGGAAGACTCGAGTAGGAGTTTAGGAATTTCTTCAGTTTGCAAAAATGGACAATGGTTGGTCTTGATTGATGCTGCAAAGGGATGTGCTACCATGCCACTTGATTTGTCCAAGTATCCTGCAGATTTTGTTGCAATCTCATTTTACAAGCTGTTTGGCTATCCAACCGGGCTTGGAGCTCTTATTGTTCGAAATGATGCTGCCAACTTACTGAAGAAGTCTTACTTTAGTGGAGTCCCCATTACAGGAACAGTTGCTGCATCAATTGCTGACATTGATTTCATTAAAAGAAGGGAAGGTATTGAGGAACTGTTTGAGGATGGCACTGTTTCATTCTTGAGCATAGCATCTATCCGCCATGGCTTCAAAATCCTTGATTCTCTAACTGTATCAGCAATATCAAGACATACATCATCTCTTGCCTTGTATACAAGGGAAATGCTTTTGGCCCTGAGGCATGGCAATGGATCTAGTGTCTGCATCCTCTATGGACGTCATAATTCAATGATGATGAAATGTGGTTATTGCATTGGCCCCAACAATCACCCCTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00337	182130	191558	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function

GO:0003824 catalytic activity

GO:0030170 pyridoxal phosphate binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000337s00026867.1	PF00266.14	Aminotran_5	215	358	4.00E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.688
SRR1783600	control	4.010
SRR1783602	moderate drought stress	3.429
SRR1811619	moderate drought stress	3.229

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.578
DRR006520	Root Summer glycyrrhizin high producing strain	2.927
DRR006521	Root Winter glycyrrhizin high producing strain	3.055
DRR006522	Root Winter glycyrrhizin high producing strain	3.017
DRR006523	Root Summer glycyrrhizin low producing strain	2.555
DRR006524	Root Summer glycyrrhizin low producing strain	2.627
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.527
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.364

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.936
SRR2868004	Drought Stress (root)	7.120
SRR2967015	Control (root)	6.596

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.093
SRR9715740	Leaf	3.372
SRR9715741	Leaf	5.901
SRR9715739	Root	1.001
SRR9715742	Root	3.589
SRR9715743	Root	3.761

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.042
SRR8749028	MeJA induced 9h	12.462
SRR8749029	MeJA induced 9h	6.225
SRR8749030	Uninduced	5.029
SRR8749031	Uninduced	14.899
SRR8749032	Uninduced	4.057

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	7.574
SRR8400027	Control - Root	6.925