Gene detail

Gene detail information of Glyur000337s00026848

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G44370.1	2.00E-167	phosphate transporter 4;6
NR	NP_001239989.1	0	uncharacterized protein LOC100812608 [Glycine max]
COG	YP_003588376.1	5.00E-47	major facilitator superfamily protein [Kyrpidia tusciae DSM 2912]
Swissprot	tr\|Q9FKV1\|ANTR5_ARATH	0	Probable anion transporter 5 (Precursor)
trEMBL	tr\|I1MQR4\|I1MQR4_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA17G00230.1}

Sequence

Transcript Sequence

>Glyur000337s00026848.1
ATGAAACTCCCGGTGCGATACCTGATAGTGATTCTAACCTTCATCTGCACCTCCGTTTGNTACATAGAGCGCGTGGGCTTCTCAATCGCGTACACGGTAGCCGCAGACGCNGTCGGTGTAAACCAATCGAGCAAAGGAACAATCCTCTCCACATTCTACTACGGTTACGCGTGTTCTCAAGTACCAGGAGGATGGGCGGCGCAGAAAATCGGTGGAAGAAGAGTCCTCCTCTTATCCTTCGTCTTATGGTCACTAACATGCGCACTACTACCTTTAGATCCAAACAGGGTCTTACTCCTCGTCATCGCTCGNTTACTCGTTGGTGTAGCACAGGGTTTCATTTTCCCTTCCATTCACACCGTTTTAGCTCAGTGGGTCCCACCTCACGAGAGATCTAGATCCGTTTCTCTAACTACCTCCGGGATGTACCTTGGTGCTGCACTTGGAATGCTTCTCCTCCCGAGCCTAGTCAAATTTAAAGGTCCCGAGTCTGTTTTCCTTGCCGAAGCTGCATTGGGTGGTTTTTGGTCTTTGCTTTGGTTTAAATACGCTTCTGATCCCAAAGCNACTGCTTCTGGCGTTGGGGAATCGCTTTTGCCAGTTAATAAAAAAACCGACACCGACGATAGGAAAGTTTCTGTTTCTTCTGCTACTNCTGCATCTTCTTCGGTTAGAATACCTTGGGTGAAGATTTTAACCAGCTTACCCGTTTGGGCAATTGTGGTTAACAATTTCACGTTTCACTATGCTCTTTANGTGCTTATGAATTGGCTTCCTACTTACTTTGAATTGGGACTTAGGCTTAGTCTTCATGATATGGGNTCTTCTAAGATGTTGCCTTATCTTAATATGTTTATTTTCTCAAACATTGGTGGTGTTGTTGCTGATTACTTGATCACTAGGAGGATAATGTCTGTTACTAGAACGAGGAAGTTTTTGAATACTTTGGGGTTTTTAGTTGCCTCTCTTGCATTGGCTGTGATCCCTAGTTTCAGGACTTCTGGTGGTGCTGTGTTCTGTTCCTCCGTGGCTCTTGGTTTCTTGGCGCTCGGCAGGGCCGGGTTTGCNGTGAACCACATGGATGTTGCTCCTAGGTATGCCGGGATTGTGATGGGGGTTTCGAATACGGCCGGTACTTTGGCCNGAATTGTTGGGGTTGATCTTACTGGGAAGCTTCTTGAGGCTGCTAAGGCTGCTAATTCTGACCTCTCTAGCCCGGAGAGCTGGAGGGCAGTGTTTTTCATTCCGGCGTTTTTGTGCATTTTTAGCTCATTGGTATTCTTGATGTTTTCGACTGGGGAGAGGGTTTTTGACTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00337	26143	27459	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055085 transmembrane transport

cellular_component
GO:0016021 integral component of membrane

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000337s00026848.1	PF07690.11	MFS_1	14	385	1.30E-50

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	15.184
SRR1783600	control	14.848
SRR1783602	moderate drought stress	5.711
SRR1811619	moderate drought stress	6.813

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	10.477
DRR006520	Root Summer glycyrrhizin high producing strain	10.706
DRR006521	Root Winter glycyrrhizin high producing strain	5.576
DRR006522	Root Winter glycyrrhizin high producing strain	5.535
DRR006523	Root Summer glycyrrhizin low producing strain	7.604
DRR006524	Root Summer glycyrrhizin low producing strain	6.854
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.707
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.928

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	27.603
SRR2868004	Drought Stress (root)	19.911
SRR2967015	Control (root)	17.849

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.957
SRR9715740	Leaf	6.598
SRR9715741	Leaf	6.931
SRR9715739	Root	15.368
SRR9715742	Root	15.860
SRR9715743	Root	17.676

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	14.653
SRR8749028	MeJA induced 9h	13.661
SRR8749029	MeJA induced 9h	6.712
SRR8749030	Uninduced	6.824
SRR8749031	Uninduced	2.042
SRR8749032	Uninduced	0.915

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	17.701
SRR8400027	Control - Root	17.143