Gene detail information of Glyur000336s00018113 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G59780.1 | 7.00E-151 | Rhodanese/Cell cycle control phosphatase superfamily protein |
| NR | KEH35238.1 | 0 | rhodanese/cell cycle control phosphatase superfamily protein [Medicago truncatula] |
| Swissprot | tr|Q9FN48|CAS_ARATH | 2.00E-09 | Calcium sensing receptor, chloroplastic (Precursor) |
| trEMBL | tr|A0A072V1I7|A0A072V1I7_MEDTR | 0 | Rhodanese/cell cycle control phosphatase superfamily protein {ECO:0000313|EMBL:KEH35238.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00336 | 169705 | 183610 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.565 |
| SRR1783600 | control | 17.895 |
| SRR1783602 | moderate drought stress | 16.673 |
| SRR1811619 | moderate drought stress | 16.378 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.549 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.444 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.131 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.482 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.170 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.304 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 80.977 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 80.531 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.896 |
| SRR2868004 | Drought Stress (root) | 21.776 |
| SRR2967015 | Control (root) | 21.810 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 52.102 |
| SRR9715740 | Leaf | 75.383 |
| SRR9715741 | Leaf | 58.729 |
| SRR9715739 | Root | 3.012 |
| SRR9715742 | Root | 13.351 |
| SRR9715743 | Root | 11.894 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.591 |
| SRR8749028 | MeJA induced 9h | 21.335 |
| SRR8749029 | MeJA induced 9h | 21.378 |
| SRR8749030 | Uninduced | 34.382 |
| SRR8749031 | Uninduced | 18.572 |
| SRR8749032 | Uninduced | 26.675 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.991 |
| SRR8400027 | Control - Root | 22.590 |