Gene detail information of Glyur000336s00018104 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G23910.1 | 1.00E-67 | |
| NR | AFK42734.1 | 0 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SR42|I3SR42_LOTJA | 0 | Uncharacterized protein {ECO:0000313|EMBL:AFK42734.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00336 | 81369 | 85295 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.415 |
| SRR1783600 | control | 7.504 |
| SRR1783602 | moderate drought stress | 6.152 |
| SRR1811619 | moderate drought stress | 6.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.452 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.427 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.585 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.912 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.469 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.323 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.623 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.642 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.704 |
| SRR2868004 | Drought Stress (root) | 12.278 |
| SRR2967015 | Control (root) | 10.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.998 |
| SRR9715740 | Leaf | 13.051 |
| SRR9715741 | Leaf | 12.119 |
| SRR9715739 | Root | 2.025 |
| SRR9715742 | Root | 6.836 |
| SRR9715743 | Root | 5.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.828 |
| SRR8749028 | MeJA induced 9h | 14.060 |
| SRR8749029 | MeJA induced 9h | 7.452 |
| SRR8749030 | Uninduced | 6.518 |
| SRR8749031 | Uninduced | 4.207 |
| SRR8749032 | Uninduced | 2.698 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.368 |
| SRR8400027 | Control - Root | 23.976 |