Gene detail information of Glyur000336s00018098 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G07130.1 | 0 | purple acid phosphatase 15 |
| NR | XP_006601875.1 | 0 | PREDICTED: purple acid phosphatase 15-like isoform X1 [Glycine max] |
| COG | YP_004655639.1 | 2.00E-23 | metallophosphoesterase [Runella slithyformis DSM 19594] |
| Swissprot | tr|Q9SFU3|PPA15_ARATH | 0 | Purple acid phosphatase 15 (Precursor) |
| trEMBL | tr|I1MY91|I1MY91_SOYBN | 0 | Purple acid phosphatase {ECO:0000256|RuleBase:RU361203} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00336 | 51758 | 56383 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000336s00018098.1 | PF00149.23 | Metallophos | 201 | 413 | 1.30E-20 |
| Glyur000336s00018098.1 | PF14008.1 | Metallophos_C | 483 | 528 | 1.50E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.104 |
| SRR1783600 | control | 11.120 |
| SRR1783602 | moderate drought stress | 3.716 |
| SRR1811619 | moderate drought stress | 3.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.750 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.518 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 37.841 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 36.842 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.537 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.695 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.809 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.704 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.749 |
| SRR2868004 | Drought Stress (root) | 8.421 |
| SRR2967015 | Control (root) | 9.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.545 |
| SRR9715740 | Leaf | 5.079 |
| SRR9715741 | Leaf | 3.839 |
| SRR9715739 | Root | 6.895 |
| SRR9715742 | Root | 7.782 |
| SRR9715743 | Root | 6.014 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.916 |
| SRR8749028 | MeJA induced 9h | 17.560 |
| SRR8749029 | MeJA induced 9h | 10.179 |
| SRR8749030 | Uninduced | 9.481 |
| SRR8749031 | Uninduced | 3.031 |
| SRR8749032 | Uninduced | 4.772 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.794 |
| SRR8400027 | Control - Root | 18.622 |