Gene detail information of Glyur000335s00017471 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31360.1 | 5.00E-13 | selenium binding |
| NR | XP_004498591.1 | 4.16E-39 | PREDICTED: selenoprotein H-like [Cicer arietinum] |
| trEMBL | tr|I1M9R2|I1M9R2_SOYBN | 2.00E-23 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G17190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00335 | 171137 | 174025 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.460 |
| SRR1783600 | control | 2.514 |
| SRR1783602 | moderate drought stress | 1.834 |
| SRR1811619 | moderate drought stress | 1.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.272 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.185 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.696 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.923 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.527 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.791 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 45.590 |
| SRR2868004 | Drought Stress (root) | 20.945 |
| SRR2967015 | Control (root) | 23.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.921 |
| SRR9715740 | Leaf | 5.222 |
| SRR9715741 | Leaf | 6.029 |
| SRR9715739 | Root | 1.934 |
| SRR9715742 | Root | 1.242 |
| SRR9715743 | Root | 1.958 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.347 |
| SRR8749028 | MeJA induced 9h | 4.640 |
| SRR8749029 | MeJA induced 9h | 7.075 |
| SRR8749030 | Uninduced | 0.930 |
| SRR8749031 | Uninduced | 0.025 |
| SRR8749032 | Uninduced | 0.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.060 |
| SRR8400027 | Control - Root | 20.745 |