Gene detail information of Glyur000335s00017463 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G22942.1 | 5.00E-10 | G-protein gamma subunit 2 |
| NR | XP_004498598.1 | 9.63E-60 | PREDICTED: guanine nucleotide-binding protein subunit gamma 2-like [Cicer arietinum] |
| Swissprot | tr|Q9FDX9|GG1_ARATH | 2.00E-16 | Guanine nucleotide-binding protein subunit gamma 1 (Precursor) |
| trEMBL | tr|I1MWH7|I1MWH7_SOYBN | 5.00E-60 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G29590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00335 | 119534 | 120824 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000335s00017463.1 | PF00631.17 | G-gamma | 58 | 115 | 1.60E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.930 |
| SRR1783600 | control | 3.893 |
| SRR1783602 | moderate drought stress | 2.662 |
| SRR1811619 | moderate drought stress | 2.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.761 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.605 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.659 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.046 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.553 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.057 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.892 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.256 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.986 |
| SRR2868004 | Drought Stress (root) | 27.070 |
| SRR2967015 | Control (root) | 24.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 32.398 |
| SRR9715740 | Leaf | 27.398 |
| SRR9715741 | Leaf | 40.684 |
| SRR9715739 | Root | 1.418 |
| SRR9715742 | Root | 2.713 |
| SRR9715743 | Root | 3.831 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.170 |
| SRR8749028 | MeJA induced 9h | 9.331 |
| SRR8749029 | MeJA induced 9h | 8.896 |
| SRR8749030 | Uninduced | 34.525 |
| SRR8749031 | Uninduced | 30.452 |
| SRR8749032 | Uninduced | 38.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.576 |
| SRR8400027 | Control - Root | 13.756 |