Gene detail information of Glyur000335s00017461 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31115.1 | 1.00E-56 | Protein of unknown function (DUF1997) |
| NR | KEH39793.1 | 9.03E-139 | DUF1997 family protein [Medicago truncatula] |
| trEMBL | tr|A0A072VEB9|A0A072VEB9_MEDTR | 3.00E-139 | DUF1997 family protein {ECO:0000313|EMBL:KEH39793.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00335 | 105746 | 110212 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000335s00017461.1 | PF09366.5 | DUF1997 | 84 | 242 | 2.20E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.929 |
| SRR1783600 | control | 10.053 |
| SRR1783602 | moderate drought stress | 8.416 |
| SRR1811619 | moderate drought stress | 8.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.814 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.544 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.586 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.603 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.956 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.630 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.382 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.645 |
| SRR2868004 | Drought Stress (root) | 15.153 |
| SRR2967015 | Control (root) | 15.597 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 25.697 |
| SRR9715740 | Leaf | 47.271 |
| SRR9715741 | Leaf | 25.640 |
| SRR9715739 | Root | 2.367 |
| SRR9715742 | Root | 5.841 |
| SRR9715743 | Root | 4.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.330 |
| SRR8749028 | MeJA induced 9h | 2.393 |
| SRR8749029 | MeJA induced 9h | 3.214 |
| SRR8749030 | Uninduced | 3.990 |
| SRR8749031 | Uninduced | 1.197 |
| SRR8749032 | Uninduced | 2.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.806 |
| SRR8400027 | Control - Root | 13.068 |