Gene detail information of Glyur000335s00017459 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31130.1 | 2.00E-53 | Protein of unknown function (DUF1218) |
| NR | XP_004498611.1 | 1.88E-86 | PREDICTED: uncharacterized protein LOC101495988 [Cicer arietinum] |
| trEMBL | tr|C6SWF3|C6SWF3_SOYBN | 1.00E-81 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU13576.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00335 | 96030 | 97674 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000335s00017459.1 | PF06749.7 | DUF1218 | 85 | 136 | 1.30E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.903 |
| SRR1783600 | control | 2.042 |
| SRR1783602 | moderate drought stress | 0.471 |
| SRR1811619 | moderate drought stress | 0.351 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.472 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.517 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.226 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.253 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.153 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.469 |
| SRR2868004 | Drought Stress (root) | 13.187 |
| SRR2967015 | Control (root) | 15.632 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.554 |
| SRR9715740 | Leaf | 11.532 |
| SRR9715741 | Leaf | 8.219 |
| SRR9715739 | Root | 5.517 |
| SRR9715742 | Root | 2.507 |
| SRR9715743 | Root | 2.710 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.357 |
| SRR8749028 | MeJA induced 9h | 0.087 |
| SRR8749029 | MeJA induced 9h | 0.158 |
| SRR8749030 | Uninduced | 0.417 |
| SRR8749031 | Uninduced | 0.483 |
| SRR8749032 | Uninduced | 0.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.655 |
| SRR8400027 | Control - Root | 5.917 |