Gene detail

Gene detail information of Glyur000335s00017447

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G25680.1	5.00E-146	molybdate transporter 1
NR	KEH39806.1	0	sulfate transporter-like protein [Medicago truncatula]
COG	YP_004180804.1	8.00E-72	sulfate transporter [Isosphaera pallida ATCC 43644]
Swissprot	tr\|Q9SL95\|MOT1_ARATH	0	Molybdate transporter 1
trEMBL	tr\|A0A072VDZ3\|A0A072VDZ3_MEDTR	0	Sulfate transporter-like protein {ECO:0000313\|EMBL:KEH39806.1}

Sequence

Transcript Sequence

>Glyur000335s00017447.1
ATGGCATACCAAAACCCTCCTTCAATTCCAACCTCAGATCCCGAAGCACTCGAAATCACTCCTACACGAACTAACCCTCCAGCCACTGCAGGTTTCACAGCCAAAGAAGCAGTGCAGAAAGTGAAAACCAACTTGGTTTTCCGTTCTAAATGGGCTGAACTTAACGGTGCCATGGGTGACCTTGGCACCTACATACCCATAATCCTTGCCTTGACCCTAGCCAGAGACCTCAACCTTGGCACCACATTGATCTTCACAGGTTTCTACAACATCATCACTGGTATGATTTATGGGGTCCCCATGCCGGTCCAGCCCATGAATGAGTTCCAAACCAAGCATATGGCATACCAAAACCCTCCTTCAATTCCAACCTCAGATCCCGAAGCACTCGAAATCACTCCTACACGAACTAACCCTCCAGCCACTGCAGGTTTCACAGCCAAAGAAGCAGTGCAGAAAGTGAAAACCAACTTGGTTTTCCGTTCTAAATGGGCTGAACTTAACGGTGCCATGGGTGACCTTGGCACCTACATACCCATAATCCTTGCCTTGACCCTAGCCAGAGACCTCAACCTTGGCACCACATTGATCTTCACAGGTTTCTACAACATCATCACTGGTATGATTTANGGGGTCCCCATGCCNGTNCAGCCCATGAAGTCCATCGCNGCAGAGGCCTTATCCNANNCCGAATTCGGCGTGCCGGAGATCATGACGGCCGGAATCCTGACCGGCGGCGTATTGTTCGTTCTNGGTGTCACTGGGCTGATGCGGCTGGTGTACAAGTTGATTCCTTTATGTGTTGTGAGGGGGATTCAACTAGCACAGGGNTTGTCCTTTGCTTTGACCGCAGTTAAATACGTGAGGAAAGTGCAAAACCTTCCGAAGTCCAAATCTTTGGGTCAAAGGCCATGGTTTGGGTTGGATGGTTTAATTCTAGCCATTGTTTGTGCTTGTTTTATTGTGATTGTGAATGGAGCTGGTGAAAAGAATCGTGGGTGTTGTGGTGGTGCTCCAGAAAGTGGTGACAATTTGGNTNGCCAAAGGAATGATCATNGTACNGAAGGTGCANCNAGAAACAGGACAAGTAGATTGAGGAAGATTATTTTTTCACTTCCTTCTGCTTTTATAATCTTTGTGTTGGGTATTGTTTTGGCCTTCATAAGAAGGAGTGAGGTGGTGCATGAAATCAAGTTTGGACCCTCCCACATAGAGGTGTTAAAATTCAGTAGGCATGCTTGGAAGAAAGGTTTTGTGAGGGGTGCAATTCCTCAACTACCCTTGTCAATCCTAAATTCTGTGATAGCTGTTTGCAAGCTGTCATCAGATCTATTCCCAGGGAGGGAATTTTCAGTTACCTCAATTTCAGTTACTGTTGGGTTGATGAACTTGGTGGGTTGTTGGTTTGGTGCCATGCCATCATGCCATGGTGCTGGTGGGCTAGCAGGGCAGTACAAGTTTGGTGGGAGGAGTGGAGGGTGTGTGGCACTTCTTGGTGCTGCCAAATTGGTGTTGGGTTTGATGTTGGGGACTTCTTTGTCACACATTTTGAACCAGTTCCCTGTGGGGATCCTGGGTGTGTTGCTCCTGTTTGCTGGGATTGAACTTGCAATGTGCTCTAGGGACATGAATTCCAAGGAAGATTCCTTTGTGATGCTCATTTGCACTGCTGTTTCACTGGTGGGGTCAAGTGCAGCACTTGGGTTTTTGNGTGGGATGGTTGTTTTTGTGCTGCTTAAGCTTAGGAGTTGGACAAAGGATAAACCACTTTCTATCATTTGGACACAGAAAAGCCCTGCATAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00335	41892	45805	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0008272 sulfate transport

GO:0015689 molybdate ion transport

cellular_component
GO:0016021 integral component of membrane

molecular_function

GO:0015098 molybdate ion transmembrane transporter activity

GO:0015116 sulfate transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--	--

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.230
SRR1783600	control	3.202
SRR1783602	moderate drought stress	1.455
SRR1811619	moderate drought stress	1.598

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	20.376
DRR006520	Root Summer glycyrrhizin high producing strain	19.809
DRR006521	Root Winter glycyrrhizin high producing strain	20.854
DRR006522	Root Winter glycyrrhizin high producing strain	20.796
DRR006523	Root Summer glycyrrhizin low producing strain	18.565
DRR006524	Root Summer glycyrrhizin low producing strain	17.825
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.986
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.666

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	22.397
SRR2868004	Drought Stress (root)	10.691
SRR2967015	Control (root)	14.061

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.751
SRR9715740	Leaf	0.226
SRR9715741	Leaf	0.426
SRR9715739	Root	18.652
SRR9715742	Root	26.226
SRR9715743	Root	25.802

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.236
SRR8749028	MeJA induced 9h	5.112
SRR8749029	MeJA induced 9h	2.020
SRR8749030	Uninduced	0.405
SRR8749031	Uninduced	0.246
SRR8749032	Uninduced	0.526

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	39.993
SRR8400027	Control - Root	53.860