Gene detail

Gene detail information of Glyur000335s00017445.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G21210.1	2.00E-102	wall associated kinase 4
NR	XP_006596249.1	1.74E-180	PREDICTED: wall-associated receptor kinase 3-like [Glycine max]
COG	YP_001958461.1	1.00E-23	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9LMN6\|WAK4_ARATH	6.00E-120	Wall-associated receptor kinase 4 (Precursor)
trEMBL	tr\|K7LY32\|K7LY32_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G09430.2}

Sequence

Transcript Sequence

>Glyur000335s00017445.1
ATGGGTCTCACAAATGTGTCTGTCCTAAGGGGCAATTTGGAAATGGAACAAAAGAAGGAGGGTGCCACCACCACCAACGTGATATACGCAACAAGGTTGTCATCGGGGTTGGAACAGGAGTTATTGCTCTATGCCTCTATTTGTGGGGATTTCCTCGCTAAATTCTTCAAGCAGAATGGTGGTTACATTTTGCTACAACGACTCTCTAGAAAAAAAGACTCCTCCCAAATTGCTCAAATTTTCACAGAGGAAGAACTAAATAAGGCCACCAACAACTTTGACGAGAGCTTCATCATTGGCAGAGGTGGTTTTGGCACAGTTTTCAAAGGTTTCCTAGCAAATAACAGAATCGTTGCTATCAAGAAGTCCAAAATAATAGATGCGAGCCAAAACGAGCAATTCATCAATGAGGTGATTGTTCTCTCCCAAATAAACCATAAGAATGTGGTCAAACTCTTGGGGTGTTGTTTGGAGACAGAAGTTCCTCTATTGGTTTATGAATTTGTCAGCAATGGTACCCTTTATGACTTTTTGCACAAAGAAGGTAAGGTGAATAATGCAACATGGAAAACTCGTCTAAAGATAGCAGCAGAGATAGCTGCAGCTCTGTCATATCTGCATTCATCAGTCTTGATACCCATTATCCACAGCGATGTTAAGAGTGCCAACATTCTCTTGGATGACATTTACACTGCAAAAGTGTCTGATTTTGGAGCTTCAAGATTGGTTCCCCAAGATCAAATTGAAATAGCCACAGTGGTGCAAGGGACACTTGGCTATTTGGACCCAGACTTTGGGGTAGTGCTTGTGGAGCTCCTAACAGGGGAGAAACCTGTCTCTTTTGACAGGACAGAAGAGAAAAGAAGCCTTCCTATGCACTTTCTATCTTGCTTAAAAGAGGACCGTGTTTCTGAAGTTATTCAAGATAGCATCTTGGATGAAGAAAATGAGCAGGAGATCAAGGAGGTTGCTATTCTTGCAGCAAAGTGCTTGAGACTCAAAGGGGAAAAAAGGCCTAGCATGAAGGAAGTGGCCATGGAGTTAGAGGGAATTATGGGGTCAATGGAGAAGACTTCTTGGATTAATACAGATGCAGTAAACGTAGAAGAGACTCAGTACTTGCTTCATGAAACATCATCATCTAGCATTTATGAAACTGGTGATAGCAGCGGACATAGAAATACTGGGTATGACAGCTTGAAGGATGGTGTACAATTGATTGTCTTGGATGATGGAAGATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00335	16423	17870	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.5.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000335s00017445.1	PF00069.20	Pkinase	98	344	1.60E-37

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.059
SRR1783600	control	0.041
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.263
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.552

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.000
SRR2868004	Drought Stress (root)	0.080
SRR2967015	Control (root)	0.021

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	10.064
SRR9715740	Leaf	1.843
SRR9715741	Leaf	14.027
SRR9715739	Root	0.000
SRR9715742	Root	1.640
SRR9715743	Root	0.928

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.336
SRR8749028	MeJA induced 9h	0.506
SRR8749029	MeJA induced 9h	0.864
SRR8749030	Uninduced	0.171
SRR8749031	Uninduced	0.185
SRR8749032	Uninduced	0.114

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.000
SRR8400027	Control - Root	0.206