Gene detail information of Glyur000334s00019202 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G19600.1 | 4.00E-113 | pfkB-like carbohydrate kinase family protein |
| NR | XP_004499171.1 | 0 | PREDICTED: uncharacterized sugar kinase slr0537-like [Cicer arietinum] |
| COG | NP_811711.1 | 3.00E-41 | PfkB family carbohydrate kinase [Bacteroides thetaiotaomicron VPI-5482] |
| Swissprot | tr|O49923|ADK_PHYPA | 6.00E-12 | Adenosine kinase |
| trEMBL | tr|I1MXX4|I1MXX4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G37040.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00334 | 167228 | 171066 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000334s00019202.1 | PF00294.19 | PfkB | 69 | 313 | 2.30E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.371 |
| SRR1783600 | control | 2.377 |
| SRR1783602 | moderate drought stress | 8.498 |
| SRR1811619 | moderate drought stress | 8.241 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.970 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.949 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.940 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.893 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.235 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.090 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.641 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.170 |
| SRR2868004 | Drought Stress (root) | 21.193 |
| SRR2967015 | Control (root) | 19.961 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.993 |
| SRR9715740 | Leaf | 3.966 |
| SRR9715741 | Leaf | 4.236 |
| SRR9715739 | Root | 8.708 |
| SRR9715742 | Root | 6.971 |
| SRR9715743 | Root | 7.894 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.888 |
| SRR8749028 | MeJA induced 9h | 2.038 |
| SRR8749029 | MeJA induced 9h | 2.098 |
| SRR8749030 | Uninduced | 3.012 |
| SRR8749031 | Uninduced | 0.328 |
| SRR8749032 | Uninduced | 1.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.678 |
| SRR8400027 | Control - Root | 13.730 |