Gene detail information of Glyur000334s00019200 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G36520.1 | 1.00E-64 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_004499173.1 | 0 | PREDICTED: myosin-9-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9SU08|AUXI1_ARATH | 3.00E-52 | Auxilin-related protein 1 |
| trEMBL | tr|A0A072VPW1|A0A072VPW1_MEDTR | 0 | Auxilin-like protein {ECO:0000313|EMBL:KEH40170.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00334 | 146064 | 156316 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000334s00019200.1 | PF00226.26 | DnaJ | 1314 | 1365 | 3.10E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 55.972 |
| SRR1783600 | control | 56.137 |
| SRR1783602 | moderate drought stress | 46.850 |
| SRR1811619 | moderate drought stress | 43.448 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 33.993 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 33.615 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.441 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.236 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.997 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 30.235 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.918 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 47.191 |
| SRR2868004 | Drought Stress (root) | 61.397 |
| SRR2967015 | Control (root) | 55.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.115 |
| SRR9715740 | Leaf | 10.810 |
| SRR9715741 | Leaf | 14.373 |
| SRR9715739 | Root | 61.405 |
| SRR9715742 | Root | 71.255 |
| SRR9715743 | Root | 73.122 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 29.695 |
| SRR8749028 | MeJA induced 9h | 36.869 |
| SRR8749029 | MeJA induced 9h | 38.943 |
| SRR8749030 | Uninduced | 62.711 |
| SRR8749031 | Uninduced | 56.907 |
| SRR8749032 | Uninduced | 36.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 158.029 |
| SRR8400027 | Control - Root | 205.252 |