Gene detail information of Glyur000334s00019187 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G21520.1 | 0 | Sec14p-like phosphatidylinositol transfer family protein |
| NR | XP_003544359.1 | 0 | PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH8-like isoform X1 [Glycine max] |
| Swissprot | tr|F4IHJ0|SFH8_ARATH | 0 | Phosphatidylinositol/phosphatidylcholine transfer protein SFH8 |
| trEMBL | tr|I1M895|I1M895_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G07850.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00334 | 52376 | 57799 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000334s00019187.1 | PF03765.10 | CRAL_TRIO_N | 85 | 130 | 1.50E-09 |
| Glyur000334s00019187.1 | PF00650.15 | CRAL_TRIO | 154 | 319 | 1.30E-31 |
| Glyur000334s00019187.2 | PF03765.10 | CRAL_TRIO_N | 85 | 130 | 1.50E-09 |
| Glyur000334s00019187.2 | PF00650.15 | CRAL_TRIO | 154 | 319 | 1.30E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.423 |
| SRR1783600 | control | 27.615 |
| SRR1783602 | moderate drought stress | 27.588 |
| SRR1811619 | moderate drought stress | 27.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.730 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 30.461 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 56.372 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 55.101 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.873 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 24.824 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.384 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.611 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 53.698 |
| SRR2868004 | Drought Stress (root) | 62.039 |
| SRR2967015 | Control (root) | 52.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 27.748 |
| SRR9715740 | Leaf | 25.283 |
| SRR9715741 | Leaf | 30.295 |
| SRR9715739 | Root | 3.318 |
| SRR9715742 | Root | 25.474 |
| SRR9715743 | Root | 21.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 28.313 |
| SRR8749028 | MeJA induced 9h | 34.759 |
| SRR8749029 | MeJA induced 9h | 31.323 |
| SRR8749030 | Uninduced | 78.883 |
| SRR8749031 | Uninduced | 149.337 |
| SRR8749032 | Uninduced | 68.467 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 74.309 |
| SRR8400027 | Control - Root | 72.795 |