Gene detail information of Glyur000334s00019184 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75388.1 | 1.00E-13 | conserved peptide upstream open reading frame 5 |
| NR | KEH40186.1 | 1.15E-45 | BZIP transcription factor bZIP124 [Medicago truncatula] |
| Swissprot | tr|P24068|OCS1_MAIZE | 3.00E-19 | Ocs element-binding factor 1 |
| trEMBL | tr|A0A072VF03|A0A072VF03_MEDTR | 4.00E-46 | BZIP transcription factor bZIP124 {ECO:0000313|EMBL:KEH40186.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00334 | 22650 | 23430 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bZIP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000334s00019184.1 | PF00170.16 | bZIP_1 | 44 | 102 | 3.60E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 291.903 |
| SRR1783600 | control | 304.204 |
| SRR1783602 | moderate drought stress | 239.995 |
| SRR1811619 | moderate drought stress | 241.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 226.460 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 227.618 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.196 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.314 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 123.898 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 118.518 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.408 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 88.766 |
| SRR2868004 | Drought Stress (root) | 54.039 |
| SRR2967015 | Control (root) | 43.395 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.563 |
| SRR9715740 | Leaf | 7.911 |
| SRR9715741 | Leaf | 14.652 |
| SRR9715739 | Root | 151.830 |
| SRR9715742 | Root | 101.156 |
| SRR9715743 | Root | 104.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.837 |
| SRR8749028 | MeJA induced 9h | 2.799 |
| SRR8749029 | MeJA induced 9h | 1.088 |
| SRR8749030 | Uninduced | 10.889 |
| SRR8749031 | Uninduced | 1.802 |
| SRR8749032 | Uninduced | 3.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 159.863 |
| SRR8400027 | Control - Root | 192.576 |