Gene detail information of Glyur000333s00033013 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54910.1 | 9.00E-24 | DEA(D/H)-box RNA helicase family protein |
| NR | KHN38284.1 | 1.55E-31 | DEAD-box ATP-dependent RNA helicase 32 [Glycine soja] |
| Swissprot | tr|Q0D622|RH32_ORYSJ | 8.00E-28 | DEAD-box ATP-dependent RNA helicase 32 |
| trEMBL | tr|A0A072UL42|A0A072UL42_MEDTR | 7.00E-32 | DEAD-box ATP-dependent RNA helicase-like protein {ECO:0000313|EMBL:KEH30392.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00333 | 108700 | 109788 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.530 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.293 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.083 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.049 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.264 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.624 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.678 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.544 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.382 |
| SRR2868004 | Drought Stress (root) | 20.101 |
| SRR2967015 | Control (root) | 25.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.357 |
| SRR8749028 | MeJA induced 9h | 7.772 |
| SRR8749029 | MeJA induced 9h | 3.134 |
| SRR8749030 | Uninduced | 4.261 |
| SRR8749031 | Uninduced | 3.091 |
| SRR8749032 | Uninduced | 3.654 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.000 |