Gene detail information of Glyur000332s00014993 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G78080.1 | 2.00E-08 | related to AP2 4 |
| NR | XP_007136233.1 | 1.27E-31 | hypothetical protein PHAVU_009G029600g [Phaseolus vulgaris] |
| Swissprot | tr|Q8H1E4|RAP24_ARATH | 2.00E-15 | Ethylene-responsive transcription factor RAP2-4 |
| trEMBL | tr|V7ARE9|V7ARE9_PHAVU | 5.00E-32 | Uncharacterized protein {ECO:0000313|EMBL:ESW08227.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00332 | 185082 | 186185 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 824.146 |
| SRR1783600 | control | 842.263 |
| SRR1783602 | moderate drought stress | 1212.637 |
| SRR1811619 | moderate drought stress | 1172.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1521.066 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1505.344 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 260.674 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 257.075 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2049.983 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2045.233 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 338.036 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 335.430 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 232.011 |
| SRR2868004 | Drought Stress (root) | 387.310 |
| SRR2967015 | Control (root) | 510.069 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 221.477 |
| SRR9715740 | Leaf | 249.495 |
| SRR9715741 | Leaf | 313.116 |
| SRR9715739 | Root | 339.833 |
| SRR9715742 | Root | 429.102 |
| SRR9715743 | Root | 405.596 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 295.290 |
| SRR8749028 | MeJA induced 9h | 776.340 |
| SRR8749029 | MeJA induced 9h | 261.015 |
| SRR8749030 | Uninduced | 790.287 |
| SRR8749031 | Uninduced | 321.770 |
| SRR8749032 | Uninduced | 346.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 392.788 |
| SRR8400027 | Control - Root | 328.084 |