Gene detail

Gene detail information of Glyur000332s00014988

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G22180.2	1.00E-90	Sec14p-like phosphatidylinositol transfer family protein
NR	XP_003638776.1	1.04E-148	Phosphatidylinositol transfer protein [Medicago truncatula]
trEMBL	tr\|G8A376\|G8A376_MEDTR	4.00E-149	Sec14p-like phosphatidylinositol transfer family protein {ECO:0000313\|EMBL:KEH34890.1}

Sequence

Transcript Sequence

>Glyur000332s00014988.1
CTTGAGTTCACTTTGGTTCCCTCGAAGTTTCGTAGCGTCAGTGAAAGGGTACACGCGTCGTTGAAGTGTGTCTCCACAATGAACACTATGAGTGTAGATCTGAAAAAACCTGCCTCTGACGACCATAAGAAAATGTTATCAGTATCACTGTCACAAGAACAGCAGGAAAAGATCACTGAGGTGAGAAGGTTGATAGGGCCATTATCAGATAAGGCTACTGTGTATTGTTCTGATGCATCCATCTCAAGGTATTTAAGATCACAAAATTGGGATGTCAAGAAGGCCTCTCAAATGTTGAAGCAGANCCTAAAATGGAGAGAAGAATACAAACCTGAAGAGATCCGCTGGGAAGAGGTTTCTGATGAAGCAGAGACAGGGAAGATGTACAGACCAAATTATTGTGACAAGCATGGGAGATCAGTGCTTATAATGAGACCAAGTCGCCAGAACTCGAAGTCAATAAAAGAACAGATGAAGTATTTTGTTTACTGCATGGAGAATGCCATTTCAAATCTTCCACCACACCAGGAAGAGGTGATCTGGCTGGTTGATTTCCAAGGTTTCAACTTTTCAAATATATCATTCAAGGTGACACGTGAAACTGCCCATGTATTACAAAAGTATTATCCANAGAGGCTGGGTCTGGCAATAATGTACAATGCACCCAAGATTTTCCAACCATTCTTCAAGATGGTAAAACCCCTGGTTGAGCCTGAGACTTGGAATAAAGTGAAGTTTGGTTATTCCAACGACCAAAACACANAGAAGATTATGGCGGATTTGTTTGATATGGATCATCTTGAATCCGCATTTGATGGGAATGATGGCACAGGATTTGATATAAATAAATATGCCAAGAGAATGAAAGAGGAGGAAGACAATAAGATGCGGACACCGCCAAACTCTCTATCATCAGTCTCACACAATATGCCTTCTTTAGAATGAGAAAATATATTATACTGATCTATATATCTTGGCTACTTCCGGGGACAGAAATGCCATGGCATTAGAATGAGAAATTACATGCCTAAATCTTTTTTAAGGAGTNTTTAGTTAACTGTAATGTAGCAAGTTACTATGACATTCTAGTTTGGAACCTAAATTCAAGAGGCATGGTGTGAAC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00332	127311	129612	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000332s00014988.1	PF03765.10	CRAL_TRIO_N	55	100	3.30E-05
Glyur000332s00014988.1	PF00650.15	CRAL_TRIO	122	274	9.00E-32

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.636
SRR1783600	control	3.671
SRR1783602	moderate drought stress	2.838
SRR1811619	moderate drought stress	2.951

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.580
DRR006520	Root Summer glycyrrhizin high producing strain	0.670
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.683
DRR006524	Root Summer glycyrrhizin low producing strain	0.591
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.541
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.665

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.415
SRR2868004	Drought Stress (root)	0.465
SRR2967015	Control (root)	0.333

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	9.045
SRR9715740	Leaf	14.147
SRR9715741	Leaf	7.408
SRR9715739	Root	0.529
SRR9715742	Root	2.956
SRR9715743	Root	2.557

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.126
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.052
SRR8749030	Uninduced	0.040
SRR8749031	Uninduced	0.034
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.312
SRR8400027	Control - Root	0.390