Gene detail information of Glyur000332s00014986 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G08685.1 | 6.00E-51 | Pollen Ole e 1 allergen and extensin family protein |
| NR | KHN19737.1 | 1.90E-101 | Pollen-specific protein C13 [Glycine soja] |
| Swissprot | tr|Q9LX15|DFC_ARATH | 6.00E-36 | Protein DOWNSTREAM OF FLC (Precursor) |
| trEMBL | tr|I1JVH2|I1JVH2_SOYBN | 7.00E-102 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G11400.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00332 | 115471 | 117533 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000332s00014986.1 | PF01190.12 | Pollen_Ole_e_I | 30 | 118 | 2.20E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1673.393 |
| SRR1783600 | control | 1684.969 |
| SRR1783602 | moderate drought stress | 643.021 |
| SRR1811619 | moderate drought stress | 638.646 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 970.229 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 959.047 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 182.805 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 178.096 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 813.435 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 818.228 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 226.172 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 226.897 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 853.311 |
| SRR2868004 | Drought Stress (root) | 446.045 |
| SRR2967015 | Control (root) | 482.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 381.949 |
| SRR9715740 | Leaf | 224.100 |
| SRR9715741 | Leaf | 225.197 |
| SRR9715739 | Root | 1190.119 |
| SRR9715742 | Root | 650.942 |
| SRR9715743 | Root | 714.675 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 524.001 |
| SRR8749028 | MeJA induced 9h | 523.779 |
| SRR8749029 | MeJA induced 9h | 427.821 |
| SRR8749030 | Uninduced | 405.562 |
| SRR8749031 | Uninduced | 88.004 |
| SRR8749032 | Uninduced | 177.811 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1076.040 |
| SRR8400027 | Control - Root | 1418.598 |