Gene detail

Gene detail information of Glyur000332s00014980

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G78020.1	2.00E-28	Protein of unknown function (DUF581)
NR	XP_004500606.1	8.85E-71	PREDICTED: uncharacterized protein LOC101511560 [Cicer arietinum]
trEMBL	tr\|I3SKN3\|I3SKN3_LOTJA	2.00E-69	Uncharacterized protein {ECO:0000313\|EMBL:AFK40825.1}

Sequence

Transcript Sequence

>Glyur000332s00014980.1
TGAAATTAAAAAGACGGTAATGGAAAAGGAAGGGTTGACGTGAGATATCATTTCTCGTTAATGATGAACATCACTCTCATGATCTCAGAATCAACGGCTGAGATTCACTCCTCGGTTTTAGGCTCTTGTTTTATTCCCCCTAAGCTTCGCTGTTTTCTTCTCCAACCTGCTCCCACACCCTCTCAATGAATCTTCTTCTTCTTCTTCTTCTTCTTGACAGTTCACTCCAACAGAGAAGAAAGCAGAAAGAAAAGCATTATTATAGCAGCTTCGCCCTAAGAGACTAGCTAACAGTACATAGACAGAGTGGTGGACGAACAGAACAGAAGAAGATGATGTTGGGGAAGAGACATCGTCCTCCAATGAAGAGAACCACAAGCATGTCAGAGATAACCTTCGATCTGAACACAATCACGGACGATGTTGATCCAAACAACCCCTTGAGCCGTCAAGGACCAGGAGGAGGAGGAGGAGGAGGAGTTGGGGTTGTTCCGTACGCACCTCCTGCTGCTGGGTTCAACGGTTCAGATCAGAGCAGGGTTTTGGCCACTGTTTCACCCAGAAACAACCATACAAGGCATTTTTCCACTGATTCGGCACACACCCCTCACTTTTTGCGTGCTTGCTTCCTCTGCAAACGCCGTTTGGTACCTGGCCGTGACATCTACATGTACAGAGGGGATAGTGCTTTCTGCAGTCTAGAGTGCCGTCAACAGCAGATGAACCAGGATGATAAAAAGGACAAGTGTTGTGTGGCATCAAAGAAACANGTTGTGGTTGTGGCTCCACCTTCTGGCTCTCACTCCACCAAAGGGGAAACCGTGGTTGCCACAAAATCTTAGCATAGCATCCCAACATTAATGACTGATGCAATATGTTAATTATTATATATATTATATTATATATATATATATATACCTCCCTGGCTCTGTTCCTGATCTCTCTTNGATCTTTTTTCCTTTTGTTCTTGTGGCTCTGTAATTTTTATGGTGGCGCCTTTTTGGAGATTGGTTTCTTTGTTTGTTAATGGGCATGCAACA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00332	99093	100395	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000332s00014980.1	PF04570.9	DUF581	86	136	4.90E-25

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	40.808
SRR1783600	control	39.920
SRR1783602	moderate drought stress	35.269
SRR1811619	moderate drought stress	34.816

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	41.576
DRR006520	Root Summer glycyrrhizin high producing strain	41.649
DRR006521	Root Winter glycyrrhizin high producing strain	0.858
DRR006522	Root Winter glycyrrhizin high producing strain	0.937
DRR006523	Root Summer glycyrrhizin low producing strain	19.070
DRR006524	Root Summer glycyrrhizin low producing strain	21.569
DRR006525	Leaf Summer glycyrrhizin high producing strain	77.197
DRR006526	Leaf Summer glycyrrhizin high producing strain	78.227

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	47.051
SRR2868004	Drought Stress (root)	57.649
SRR2967015	Control (root)	50.416

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	22.729
SRR9715740	Leaf	38.395
SRR9715741	Leaf	25.301
SRR9715739	Root	22.206
SRR9715742	Root	18.579
SRR9715743	Root	17.665

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.171
SRR8749028	MeJA induced 9h	0.197
SRR8749029	MeJA induced 9h	0.176
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.002
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	61.406
SRR8400027	Control - Root	78.120