Gene detail

Gene detail information of Glyur000332s00014975

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G22150.1	0	sulfate transporter 1;3
NR	XP_007136221.1	0	hypothetical protein PHAVU_009G028500g [Phaseolus vulgaris]
COG	YP_005320855.1	4.00E-88	sulfate transporter [Saprospira grandis str. Lewin]
Swissprot	tr\|Q9FEP7\|SUT13_ARATH	0	Sulfate transporter 1.3
trEMBL	tr\|V7ASE7\|V7ASE7_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW08215.1}

Sequence

Transcript Sequence

>Glyur000332s00014975.1
CCTTGGAGTTATATAATCCAATAGCTTCATAGCAGCTTTCCTGCTCAAGAAGGCATTATACAGCTTGAACCAGTGACCATTCAAATTTTTTGTCTCATATCCCTTTCCTTCTCTTCAGAAAATGGGTCCTCCTCCAGGTGATGAAGATCTTGAGAAAAACGTGATGGACGCTAGAAGTTTGTCACCATCACATGTTCAAGCTGCACCATATGCCCACAAAGTGGCAATTCCTCCAAGACAGAACTTGCTCAAGGAATTCCAAGCCACTATAAAAGAAACATTCTTTGCTGATGATCCTCTACGGTCCTTCAAAGACCAAACCAAATCACGGAAATTCATCCTTGGTATTGAGGCCATATTCCCTATACTTAATTGGGGGAGAGCTTACAACCTTAAAAAATTTAGAGGGGATGTTATATCTGGTCTCACTATTGCAAGTCTTTGTATTCCTCAGGATATTGGATATGCCAAGCTTGCACATTTGGCTCCACAGTATGGACTATACTCAAGCTTTGTTCCACCACTGATTTATGCTGTGATGGGTAGTTCTCGTGATATTGCAATAGGACCAGTGGCAGTGGTTTCGCTCTTGTTGGGGACTTTACTTAGTAATGAGATTGACCCTGTTACACATGCAGCAGAATATCGNCGACTTGCTTTTACAGCCACTTTTTTTGCTGGGATTACCCAAGCAACGCTTGGGATTTTTAGGTTAGGATTCTTGATTGACTTCCTATCCCATGCTGCTATTGTCGGTTTTATGGGGGGTGCTGCCATCACAATTGCCCTTCAACAGCTTAAGGGTTTCCTTGGCATNAAAAGTAAAATGTTCACAACGAAAACTGATATTGTCTCTGTGATGCATTCAGTATTCTCAACAGCCCATCATGGATGGAACTGGCAAACTATATTAATCGGAGCTAGCTTTTTGGGTTTTCTTCTGGTCGCAAAACATATCGGAAAGAAAAACAAGAAATTCTTCTGGGTGCCAGCAATTGCCCCATTGATATCCGTTGTGCTGTCCACCATTTTTGTATTCATAACACGTGCAGATAAGCAAGGAGTAGAAATTGTAAATCANATAGAGAAAGGGGTCAATCCTTCATCTGTTAAACAAATTTACTTTAGCGGTGAATACCTTGGAAAGGGTTTTAAAATTGGCGTCATGGCAGGCATGATAGCATTGACTGAAGCCATAGCTATTGGAAGAACATTTGCATCTATGAAGGACTATCAACTGGATGGAAACAAAGAAATGGTGGCATTAGGAGCAATGAATGTTGTTGGTTCTATGACTTCCTGTTATGTGGCAACTGGTTCTTTCTCTCGGTCTGCGGTTAATTTCATGGCTGGCTGCCAAACTGCAGTCTCCAATATTGTGATGTCAGTAGTTGTGTTTTTAACCCTGCAATTCATCACTCCCCTTTTCAAGTACACTCCAAATGCCATTCTAGCTGCCATCATCATTTCTGCAGTCATCAACCTTGTGGACTATCAGGCAGCAATTTTGATTTGGAAGATTGATAAATTTGATTTTGTTGCTTGCATGGGAGCATTCTTTGGGGTTTCCATATCTTTTGCAAAGATCCTACTACAAGTCACAAGGCCCAGAACTGCTATTTTGGGGAAGATTCCAGGGACTTGTGTCTATAGAAACATCCTACAATACCCTGANGCTAGTAAGATTCCGGGTGTACTGATTGTAAGAGTCGATTCTGCAATATACTTTTCCAACTCCAATTATGTTAAAGAAAGGATATTAAGATGGCTGATAGATGAAGAAGAAATGAAAAGAGACTACCACACAAAAATCCAGTTTTTGATAGTTGAAATGTCACCCGTAACTGACGTGGATACCAGTGGCATCCAAGCCTTTGAAGAGTTACACAGAAGTCTAGAGAAGAGAGGTGTTGAGCTAGTTCTGGCAAATCCTGGCCCTGCAGTGACAAACAAGCTTTACACATCCAATTTAGCCAACTTAATTGGGGAGGACAAGATCTTCCTCACCGTTGCAGAGGCTGTAGCATACTGTTCTCCAAAGCTGGCTGAGGACCCATGAAAACAACAAAATTAAGATTCTGTATGTATNTTTGCTTCCTTTGGGAGAGAAAATTGGGATGCAAATGGAAATGGAAATGGGTGTGGTGTGGGTGTAGTATATAGACCACAATGGCTTTCAACTTGGTAGATAGTAGCAGCAAGCAAGTCAAAAGGAGGAAGGATGATGAGAATGAGATAGATAATATGCACTACAAAAAAAGTTAGTAGAGTGAAGTGGCCTCTCTCTCTGACATTGCAAATGAGTGCTCCTCCGGTATCCTTATCCTAAAGTGGGGAAATCAAATCAAATCAAATCAAATACTATACAATAAAAAGAAAAATATAAAAGGTGCGCCAATTGTGCACTCCACTCTAATAAAGCATTAACTACCCGTCCCCCATTGTATTGTTTTTACTTGATTGTCCATAGGGTCTAACTCAAGTCAGGTGCCTNTAAGTGTAATTGTATGAAGAATGGTCTCCATTTTATAAGGGAAGCTGTTCATCCCTCCCTCAGTCCCTCCCTCATTGCCCCGGCAGGTCCTAAACAAAGATTTATATGTAACATGCAACAAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00332	34437	42102	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0008272 sulfate transport

GO:0055085 transmembrane transport

cellular_component

GO:0005886 plasma membrane

GO:0016020 membrane

GO:0016021 integral component of membrane

molecular_function

GO:0008271 secondary active sulfate transmembrane transporter activity

GO:0015116 sulfate transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000332s00014975.1	PF13792.1	Sulfate_tra_GLY	80	161	1.30E-31
Glyur000332s00014975.1	PF00916.15	Sulfate_transp	193	473	1.20E-104
Glyur000332s00014975.1	PF01740.16	STAS	516	633	1.20E-30
Glyur000332s00014975.2	PF13792.1	Sulfate_tra_GLY	110	191	1.40E-31
Glyur000332s00014975.2	PF00916.15	Sulfate_transp	223	503	1.30E-104
Glyur000332s00014975.2	PF01740.16	STAS	546	663	1.20E-30
Glyur000332s00014975.3	PF13792.1	Sulfate_tra_GLY	80	161	1.30E-31
Glyur000332s00014975.3	PF00916.15	Sulfate_transp	193	473	1.20E-104
Glyur000332s00014975.3	PF01740.16	STAS	516	633	1.20E-30
Glyur000332s00014975.4	PF13792.1	Sulfate_tra_GLY	80	161	1.20E-31
Glyur000332s00014975.4	PF00916.15	Sulfate_transp	193	451	2.20E-89
Glyur000332s00014975.4	PF01740.16	STAS	494	611	1.10E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.505
SRR1783600	control	2.372
SRR1783602	moderate drought stress	3.752
SRR1811619	moderate drought stress	3.780

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.373
DRR006520	Root Summer glycyrrhizin high producing strain	2.499
DRR006521	Root Winter glycyrrhizin high producing strain	5.897
DRR006522	Root Winter glycyrrhizin high producing strain	5.793
DRR006523	Root Summer glycyrrhizin low producing strain	1.160
DRR006524	Root Summer glycyrrhizin low producing strain	1.125
DRR006525	Leaf Summer glycyrrhizin high producing strain	15.648
DRR006526	Leaf Summer glycyrrhizin high producing strain	15.628

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.702
SRR2868004	Drought Stress (root)	5.258
SRR2967015	Control (root)	4.860

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	18.038
SRR9715740	Leaf	23.614
SRR9715741	Leaf	22.312
SRR9715739	Root	0.270
SRR9715742	Root	0.477
SRR9715743	Root	0.427

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.491
SRR8749028	MeJA induced 9h	11.814
SRR8749029	MeJA induced 9h	1.809
SRR8749030	Uninduced	39.296
SRR8749031	Uninduced	11.177
SRR8749032	Uninduced	11.779

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.358
SRR8400027	Control - Root	2.314