Gene detail information of Glyur000331s00020711 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21600.2 | 9.00E-79 | plastid transcriptionally active 6 |
| NR | XP_004502536.1 | 4.77E-129 | PREDICTED: uncharacterized protein LOC101502256 [Cicer arietinum] |
| trEMBL | tr|M5XFY6|M5XFY6_PRUPE | 1.00E-122 | Uncharacterized protein {ECO:0000313|EMBL:EMJ24381.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00331 | 74306 | 78552 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.979 |
| SRR1783600 | control | 8.335 |
| SRR1783602 | moderate drought stress | 8.043 |
| SRR1811619 | moderate drought stress | 8.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.367 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.601 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.463 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.396 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.151 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.340 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 26.100 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 25.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.115 |
| SRR2868004 | Drought Stress (root) | 5.486 |
| SRR2967015 | Control (root) | 5.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 25.038 |
| SRR9715740 | Leaf | 45.508 |
| SRR9715741 | Leaf | 25.750 |
| SRR9715739 | Root | 8.811 |
| SRR9715742 | Root | 9.895 |
| SRR9715743 | Root | 10.525 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.382 |
| SRR8749028 | MeJA induced 9h | 20.808 |
| SRR8749029 | MeJA induced 9h | 11.703 |
| SRR8749030 | Uninduced | 3.292 |
| SRR8749031 | Uninduced | 2.502 |
| SRR8749032 | Uninduced | 3.929 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.462 |
| SRR8400027 | Control - Root | 13.234 |