Gene detail

Gene detail information of Glyur000330s00019533.1

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G48050.2	BAH domain ;TFIIS helical bundle-like domain
NR	XP_004489321.1	PREDICTED: serine-rich adhesin for platelets-like isoform X1 [Cicer arietinum]
trEMBL	tr\|A0A072U5H4\|A0A072U5H4_MEDTR	BAH domain-containing protein {ECO:0000313\|EMBL:KEH24902.1}

Sequence

Transcript Sequence

>Glyur000330s00019533.1
AAAAAAACCCAAAATTTTCTCTCAAAATCTCGGCGTTTCGCGTGAGCCAAGCGCATCTCCTTCTCTCTCTTTCTCTCTCTATCTTTTTCTTTTCTCTCTCATCGTCGCGGTTCCTTCGCACAAAATCTCTCTGGATTTTCGCTATTTCCAGAACCGATCAAAATTTTCATTCATTCATTCAATCGATCCTTTCTTTCGATGACACACAAACAACTCTTTCTTCCTCTCTCCGATAAAATCTCTTTCTCCTCTTTGCCACATAAGCCCTAGAAGAATCGAAAAATTAAGAAGCCCTAGAAAAACTCTATTTCCCCCCTTTTGTTGTTCGATTCGTGTGCTTTCACGGTTCGTATGGAGGATTTGAGGAGGAGATCTGCGAGGTCGCTTGCTTGATCTAGGGTTTCCCCCTCTTGATTGTTGTGGTTGTTCCGAATCTAGGGTTTTCGAAGGTGTGGGAATTGATGTTTCTTTTCAGGGACGAAGGTGGGATCGACTCGGAAGATGGAGGATTATGCATGGGTTCGGTGGTGAGGAGTGGAAACAGAGCCGGCACATGTGGCCTGTACCTTCCAACGCGACGACTGTAGCCATCGATTCTTCACCGTCTCAATTTATATGCAAAGATGGACGCAAGATTCGTGTTGGTGACTGTGCACTTTTCAAGCCTCCCCAGGACTCCCCTCCCTTTATTGGAATAATTCGCAAGTTAACATTCGAAAAAGAAGAAAGTCCAAGTTTAGAAGTGAATTGGTTTTACCGACCTGCTGATCTGAAGCTTGCTAAAGGGATTGCACTGGAAGCTGCACCGAACGAAGTCTTTTACTCCTTTCACAAGGATGAAATACATGCTGCGTCATTACTCCATCCGTGTAAAGTCGCATTTCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCCGCATTTGTCTGTAGACGAGTGTACGACATTGAGAACAATTGTTTACGGTGGCTAACTGATAAGGACTACATNAATGAACAACAGGAAGAAGTTGACCAGCTATTAGACAAGACAAAACTAGAAATGCATGGGGCTGTGCAATCAGGAGGCCGTTCTCCAAAACCCTTGAATGGTCCAACATCAACACAGTCAATGAAATCTGGTTCTGATAACATTCAAAATAGTTCTTCCTTTGGTGTACAGGGTAAGGGAAAAAAGAGAGAACGAGGTGATCAGGGATCTGAGTCATCTAAGAAAGAGCGGTTATTTAAGATAGAAGATGGAGATTCTGGTCAATTTAGACCGGAGAGCACGTTAAAGTCTGAGATTGCTAAAATCACTGATAAGGGTGGGCTNGTGGATTTTGAAGGAGTTGAAAGACTGGTACAGCTCATGCAGCCTGATAGTGCTGATAAAAAAATAGATTTGGCTGGGCGAATAATGCTTGTCGACGTAATAGCACTCACAGACCGGTATGACTGTCTTGGCTGGTTTGTACAACTCAGGGGTTTGCCTGTGTTGGATGAATGGCTGCAGGAGGTTCATAAGGGCAAAATTGGTGATGGTAATATGCCTAAAGAAAGCGATAAGTCCGTTGAAGAATTTTTGTTAGCTTTACTTCGTGCATTGGATAAGCTTCCTGTGAACCTTCATGCACTACAAACCTGTAATGTTGGAAAGTCTGTCAATCATTTACGCACCCACAAAAATTCTGAAATTCAGAGGAAAGCCAGGAGTTTAGTAGACACATGGAAGAAACGTGTTGAAGCTGAAATGAATATGACCGATTCAAAATCTAGTTCAACTCGTGCTGTTTCTTGGCCTTCAAAGCCAGCTGCTTCCGAGGTTTCTCACCTTGGAAATAGGAAAACTGGGGGATCCTCTGAGAATGTTGCAAAGAGCTCTGCTATTCAACCTTCGGTATCTAAAAATTCCCAAGCTAAACTTAGTTCCGGTGAAGCATTATCCAAGCTTTCTTCATCTCCTGGCTCAACTAAATCAATGACTGCCTCAGTAGGCACTGGCAGTAACTCAAGAGATCAAAATGCTAAAGNCCTGGTTGGAGCTGCAACATCAGATCTGCCTCTGACACCTATCAAGGAGGAGAGGAGCAGCAGTTCTAGTCAATCTCAAAACAACAGCATATCTTGTTCTAGTGAACATGCGAAGGCTATTGGTTCTTGCCGGGAAGATGCAAGGAGCTCCACTGCAGTGTCGATGAATGTGAGCAAAACTCCTGGTGGAGCATCTCGAACTCGGAAGTCGAATAATGGTCTTCATGGAGCTGGTGTTGCTGTAGTACAGAAGGAGCATAGCTCTGCAAAAAATTCAACAAGAAATTCACCTTCAGATAAAGTTTCACCAACCCGAGTGTCCCATGAGAAATCACCTGATCAGCCCCTTACCGATCAAGGCAGTAGTCAGCGACTGATTCTCAGGTTGCCAAACACTGGTCGTAGTCCTTCAAGGGGAGCTAGTGGGGGCCCTTTTGAAGAACCTGCTATTACCTGCGGCAAAACATCACCTGCTGACAAGAATGATAATCAGGACAGAAGAGTGAAAGCTAAAACCGATTGTTTGCAGACGCATACTGCATCAAATGTGATAAATGACACATGCGATGCTAATGAAATGACTGGTTGCGATGAAGCCAAGGGCTCTCCACTGGTGGATGAGCGCTGCAGGGCTCATGAAGACGGTGATAAAGTAGCAGAAACGTCAAAACCATCTGGATTTGTTTCTAGAGGTGGGCATACTTATGATGCTTCTTTAAGCCCCATGAATGCACTAGTTGAAAGCTGTGTGAAATTTTCTCAAGCTAGTGCCTGTGTGTCCCCTGGAGATGATGGGATGAATCTGCTTGCTACTGTGGCTGCAGGGGAAATGTCCAGATCTGAAAATGTCTCACCTCTGGCTTCACCTCAGAGGAAGTCTCCTGCAGCTGTTGAATCAAGCTCAGGGAATGATTGTAAGTTAAAAAATTCTGTTGAAGCAGCTTCTCGCACTCCCGGACAATCTGATGGTGGGCCTACTGGAGAACATCCTTTGAATACTGTTGAGCCATTGCAATTCAAAAATGATTCCCAGCTTCCTGTTACGACAATGTCACGTGATTTTCCAGGAGATGGTGAAGCCATTTCATCCAGTTGTATAGAAAAAACTGGTGATGGCAGGACTCAAACAAGTCTCTCTAATAAAGATGTGTTACAGAATGCTGACGGTCCATGCTTGCGGCCTGAAACCAAAGAGGATACTTCTGAAACTGTATTGCCAGCTAAAAATGAGACTCATGCAGAAGCTAGAGGAGTGGACCATTTTCAGGAGCAGATGGAATCGGGAAGTCAATGGGCCAAAAGCAGCAGTAGTTCAGACTCTAAATTGAAGTCAATGTCTTCCTCTTTTGATGATGATCAGAAGATCAATCACGCAGATGAGGGGATCACAGAGCATGAGAAAATGCTGGGTTCAAAAGTCGTTGCAATTGTTATGACTGAAAATGAACTAGGTAAAAAATCACCTGAGTTATCTTCAGTTGTAGATAATGAGAACCAGATTAGTGTAGAGAAAGTGGAAGGTACGGGTATGTCAGTGCAAAAAGGATCTCCAGTTGTAGGAAAATGTGAGTCCACAGATTTGAAAAAGGAGGATGTCACATCACCTGCTCCTGGTAATGCTTTGACGGTATCCAGGGATGAAAATGCAGATGACATANAGCCAGTTGAGATTGAGCCTGATGGTAAACGAATGCATCTGGATGTAGCAGTTGCTGATGGCGTTAAGGATTGTGCTGAAGATAATTTGAGTAGGAAAGAGGTTATTGGTCACTGTTCTACCTCATCAGTTCACCCAGATTTGCCAACTATTCCTGGGAAAGACGAGGAAGTGCCTAAAACATGTGAAGAGTCTAACTTAGATGGAAATAAATCTGAGGTTGCAGGAGAATGGCATGCACACAATGTTAATCCATCCTCAACTGCAGCTGGATCTGATGCAGCAGTAAAACTTGACTTTGATTTAAATGAAGGCTTTCCTGTTGATGATGTAAGCCAAGGGGAGATTGTTAGACCGGAAGAGCCTATCACATCATCTGCAGTTCATGTTCCCTGCCCGTTGCCTTTTCCCATTCCGACCATCTCTGGGGCCTTCCATCCTTCGATCACGGTGGCATCTGCCGCCAAAGGACCGGTTATTCCACCAGAAAACCCGTTGCGGAGCAAGGGGGAACTTGGATGGAAAGGGTCTGCTGCTACAAGTGCATTCCGGCCAGCTGAACCTAGGAAAAATGCCGAGACACCATCAAATACTAGTGATATTTCTTCTGTTGATGCCCCTTCAACCAAACAATGTCGCCCTCCTTTAGATTTTGATTTAAATTTTGATTTAAATATGCCAGATGAAAGAAGCTTTGAGGATGTTCCTTCCCGGGGTTCCTTGGAAACTCGACTGCATGATCGGAGCACGGTGGGACTTGATCTTGATTTAAACCGGGCAGATGAGACTGCTGAAGCAGGATCTTTCTCTATGGGCAAACTGGATATTCCTTCTTTACCAAGTAAACCTTCATTGTCCAGTGGGTTATCTAATGGCGGAAGTGTCTCTAGAGACTTCGATTTAAATAATGGGCCAGGCCTTGATGAAGTTGGCACTGAAGTCCCAGCTCGGAGTCAGCAGATGAAAAGTACTGCACAATTTTCAACTGCTGTTCATGGCACCAGAACAAATAATGCTGAATTTGGGAATTACTCTTCATGGTTTCCTCCGGGCAATTCTTATTCTGGAATTACTGTTCCGCCACTTCTGCCTGGTAGAGGGGAGCAGAGTTATGTTTCTGGTTCTGGGGCACAGCGGATCATAGGTCCTACAGGCAGCGCACCTTTTGGTCCTGAAATTTACAGGGGGCCAGTGCTTTCATCCTCTCCAGCTGTTGCTTATCCACCTACTACACCCTTTCCATATCCAGGATTTCCATTTGAAACCAATTTTCCACTATCTTCAAACTCCTTTTCTGGTTGTTCGACAGCATTTATGGATTCATCAACCGTGGGTGGGCTTTGCTTTCCTACCATGCCCTCACAGCCAGTTGGGCCTGGTGGCGTTGTCTCATCCACATATCCCCGTCCCTATGTTATGAGTCTCCCTGGCGGTACAAGTAATGTTATTCCTGACAGCAGAAAATGGGGAAGCCAAAGTCTGGATCTTAATTCCGGCCCTGGTGGTACAGATGCTGAGCGCAGAGATGATAGATTGCCTTCGGGATTGAGGCAGATGTCTGTCCCAAGTTCGCAAGCCTTGATGGAGGATCACTTGAAGATGTTTCAGATGGCAGGTGCATTAAAAAGAAAGGAACCTGATGGTAGTTGGGATGGAACTGATAGATTCAGTTACAAACATCCCTCATGGCAGTAGTAGGATAATGGCTCTTCAAAGCAATTTTTTTTAAGAGGTCAGCCCCTTCTTTTGTGGAAAATGTCCGAAAAATTGGGGGAAATTAATCAGTGTTGAGCCATGAAGAATGAGCAGAGAAGCTACCCTTGCAGCCTCTTCGTTTTTGACTTGGTAAAGCGATCAGAGCCTCTGATGCACTTGTTTTGTGTAGATCTGCTCCCACAGATTGCCCCTTTGCAGATGAGTTTTTTTCCTGTGTAGATATCTAACTGAAACAGCAGCAGGTGTGATAGTGCCGCCTCCTAGAATCTCAGAGAAATTGGCATCAAGTGTTTGACTGTGACTGTTCTGCAATAGCACCACGGAGAAGCCCAATCCATTCTCCAACATTTGGAACGAGGAGAGGGTTGTGGATGTATGAACTGGCTGGGCTTTAGGCCAGTTTGTCTTCTTTAAATCATTTTTTTTTCTCTTCCAACTTTTGTTGCATATATAGTTATTGCTGTAGTGTTGACTTTGCGAATTTTGTCACTTTCACATTCTGGTTATTATTGATGANGATATATGCACAGGTTAGCCACCATG

Protein Sequence

>Glyur000330s00019533.1
MHGFGGEEWKQSRHMWPVPSNATTVAIDSSPSQFICKDGRKIRVGDCALFKPPQDSPPFIGIIRKLTFEKEESPSLEVNWFYRPADLKLAKGIALEAAPNEVFYSFHKDEIHAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIENNCLRWLTDKDYXNEQQEEVDQLLDKTKLEMHGAVQSGGRSPKPLNGPTSTQSMKSGSDNIQNSSSFGVQGKGKKRERGDQGSESSKKERLFKIEDGDSGQFRPESTLKSEIAKITDKGGLVDFEGVERLVQLMQPDSADKKIDLAGRIMLVDVIALTDRYDCLGWFVQLRGLPVLDEWLQEVHKGKIGDGNMPKESDKSVEEFLLALLRALDKLPVNLHALQTCNVGKSVNHLRTHKNSEIQRKARSLVDTWKKRVEAEMNMTDSKSSSTRAVSWPSKPAASEVSHLGNRKTGGSSENVAKSSAIQPSVSKNSQAKLSSGEALSKLSSSPGSTKSMTASVGTGSNSRDQNAKXLVGAATSDLPLTPIKEERSSSSSQSQNNSISCSSEHAKAIGSCREDARSSTAVSMNVSKTPGGASRTRKSNNGLHGAGVAVVQKEHSSAKNSTRNSPSDKVSPTRVSHEKSPDQPLTDQGSSQRLILRLPNTGRSPSRGASGGPFEEPAITCGKTSPADKNDNQDRRVKAKTDCLQTHTASNVINDTCDANEMTGCDEAKGSPLVDERCRAHEDGDKVAETSKPSGFVSRGGHTYDASLSPMNALVESCVKFSQASACVSPGDDGMNLLATVAAGEMSRSENVSPLASPQRKSPAAVESSSGNDCKLKNSVEAASRTPGQSDGGPTGEHPLNTVEPLQFKNDSQLPVTTMSRDFPGDGEAISSSCIEKTGDGRTQTSLSNKDVLQNADGPCLRPETKEDTSETVLPAKNETHAEARGVDHFQEQMESGSQWAKSSSSSDSKLKSMSSSFDDDQKINHADEGITEHEKMLGSKVVAIVMTENELGKKSPELSSVVDNENQISVEKVEGTGMSVQKGSPVVGKCESTDLKKEDVTSPAPGNALTVSRDENADDIXPVEIEPDGKRMHLDVAVADGVKDCAEDNLSRKEVIGHCSTSSVHPDLPTIPGKDEEVPKTCEESNLDGNKSEVAGEWHAHNVNPSSTAAGSDAAVKLDFDLNEGFPVDDVSQGEIVRPEEPITSSAVHVPCPLPFPIPTISGAFHPSITVASAAKGPVIPPENPLRSKGELGWKGSAATSAFRPAEPRKNAETPSNTSDISSVDAPSTKQCRPPLDFDLNFDLNMPDERSFEDVPSRGSLETRLHDRSTVGLDLDLNRADETAEAGSFSMGKLDIPSLPSKPSLSSGLSNGGSVSRDFDLNNGPGLDEVGTEVPARSQQMKSTAQFSTAVHGTRTNNAEFGNYSSWFPPGNSYSGITVPPLLPGRGEQSYVSGSGAQRIIGPTGSAPFGPEIYRGPVLSSSPAVAYPPTTPFPYPGFPFETNFPLSSNSFSGCSTAFMDSSTVGGLCFPTMPSQPVGPGGVVSSTYPRPYVMSLPGGTSNVIPDSRKWGSQSLDLNSGPGGTDAERRDDRLPSGLRQMSVPSSQALMEDHLKMFQMAGALKRKEPDGSWDGTDRFSYKHPSWQ

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00330	162627	169929	+

Gene family

Gene family	subfamily
Transcription Factors Family	IWS1
EAR motif-containing Proteins	IWS1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006351 transcription, DNA-templated

cellular_component
GO:0005634 nucleus

molecular_function

GO:0003677 DNA binding

GO:0003682 chromatin binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000330s00019533.1	PF01426.13	BAH	41	149	5.90E-11
Glyur000330s00019533.1	PF08711.6	Med26	355	404	2.40E-14

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	38.821
SRR1783600	control	39.177
SRR1783602	moderate drought stress	38.211
SRR1811619	moderate drought stress	38.033

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	32.447
DRR006520	Root Summer glycyrrhizin high producing strain	32.022
DRR006521	Root Winter glycyrrhizin high producing strain	27.541
DRR006522	Root Winter glycyrrhizin high producing strain	26.895
DRR006523	Root Summer glycyrrhizin low producing strain	33.697
DRR006524	Root Summer glycyrrhizin low producing strain	33.608
DRR006525	Leaf Summer glycyrrhizin high producing strain	25.601
DRR006526	Leaf Summer glycyrrhizin high producing strain	25.337

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	64.291
SRR2868004	Drought Stress (root)	74.922
SRR2967015	Control (root)	74.969

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	38.683
SRR9715740	Leaf	37.197
SRR9715741	Leaf	45.731
SRR9715739	Root	17.750
SRR9715742	Root	68.009
SRR9715743	Root	60.286

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	22.227
SRR8749028	MeJA induced 9h	44.186
SRR8749029	MeJA induced 9h	18.507
SRR8749030	Uninduced	25.480
SRR8749031	Uninduced	31.352
SRR8749032	Uninduced	22.556

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	50.987
SRR8400027	Control - Root	49.260