Gene detail information of Glyur000330s00019530 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15395.4 | 2.00E-19 | |
| NR | KHN37165.1 | 8.38E-31 | hypothetical protein glysoja_037289 [Glycine soja] |
| trEMBL | tr|K7LV12|K7LV12_SOYBN | 1.00E-27 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G23171.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00330 | 149979 | 150796 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.341 |
| SRR1783600 | control | 7.824 |
| SRR1783602 | moderate drought stress | 6.695 |
| SRR1811619 | moderate drought stress | 6.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.874 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.868 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.453 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.796 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.031 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.949 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.822 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.193 |
| SRR2868004 | Drought Stress (root) | 23.527 |
| SRR2967015 | Control (root) | 21.191 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.499 |
| SRR9715740 | Leaf | 28.162 |
| SRR9715741 | Leaf | 25.465 |
| SRR9715739 | Root | 5.028 |
| SRR9715742 | Root | 6.759 |
| SRR9715743 | Root | 6.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.110 |
| SRR8749028 | MeJA induced 9h | 14.523 |
| SRR8749029 | MeJA induced 9h | 14.278 |
| SRR8749030 | Uninduced | 12.691 |
| SRR8749031 | Uninduced | 7.097 |
| SRR8749032 | Uninduced | 8.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.767 |
| SRR8400027 | Control - Root | 30.105 |