Gene detail

Gene detail information of Glyur000330s00019524

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G14910.1	2.00E-28	Heavy metal transport/detoxification superfamily protein
NR	XP_004489330.1	2.59E-43	PREDICTED: uncharacterized protein LOC101494110 [Cicer arietinum]
trEMBL	tr\|I3SJA2\|I3SJA2_LOTJA	1.00E-42	Uncharacterized protein {ECO:0000313\|EMBL:AFK40344.1}

Sequence

Transcript Sequence

>Glyur000330s00019524.1
GAAACACTAGGAATTTTGGATAGATAGATAGATAGATAGGGGTGGCAAAACAAGAGCAACTACAAATCCAAAGCTACCAAACCAGTTGGGGCACTGTTTGTTTGAAGAATGGCCACACTAATCTCATCTTCATCTCTTCTACACTCCATTCGCCTCTCTTCTTCTTCTTCTACACTCCCTTTTGCTTCTGCTTCTTCTTCTCCCTCCCTTGCGTTTTGCACCTTTCNCCACCACCATCGTAGTTCAGCTCTGAAGAAGGCTCTGCCAATAAAGAACCACCGTAGGTTATAACGAGTGGCCAAGGCAGTGGAAGAAGAAACCCAACAAGGAGAACAAGAAGAAGGAGTCACCACTGAATCTGAACAACAGCAACAGCAACAACCCGTTGTGGTTCCCATTTCCCCATCCGACACACTCACCATGTTCTTTCAGGCAGAGGGAACATTGAATGAAGCAGCTGTTCCAGCTTTGACCAAAGCTTTAGAGGAGACNGAGGGTGTTACCAATTTGAAGGTTCAGCTTTTTGAGGGACTCACAACTTTAGAGTTGGAAAAACAGACAACAATCCAAGCTACAGGAGTGGCTTCTAGTCTGGTAGAAGCCATACAAGGTTTAGGCTTCAAATTACAGACATTAAATCTGAGTTTTGATGATGAAGAAGTTGCAACTGCCTAGACTAAATCTACTGGTGAGGACTAAGAACAAGAGAGTTTGAGGGAGGCAAAAAATAAAAAAAAAGAAGAACGATTTGAAGAAGTAGCCTGTTCACACTTTCCTGACTAAAGCCTACTGCAGTAACTTTGGTTTGTATAGGTGTTGATTAACATTTTTTGTTTTTGGAGAGTGTTGATTAACTTTGTTATTATTATTATTGAAAGAGTATTTGATGATAAAAGCCTTGATATGGATGTGAGAATATGAACATTATTAAGTCTGAACACATACATATAAACTTGTAAGTATGAGTGAGAATAGGTCAGGACCCTTGACAGGCGTCCA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00330	112148	114936	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0030001 metal ion transport

molecular_function
GO:0046872 metal ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--	--

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	22.538
SRR1783600	control	22.293
SRR1783602	moderate drought stress	22.047
SRR1811619	moderate drought stress	22.006

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	20.605
DRR006520	Root Summer glycyrrhizin high producing strain	20.561
DRR006521	Root Winter glycyrrhizin high producing strain	7.032
DRR006522	Root Winter glycyrrhizin high producing strain	6.809
DRR006523	Root Summer glycyrrhizin low producing strain	6.959
DRR006524	Root Summer glycyrrhizin low producing strain	6.943
DRR006525	Leaf Summer glycyrrhizin high producing strain	220.552
DRR006526	Leaf Summer glycyrrhizin high producing strain	218.202

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	22.469
SRR2868004	Drought Stress (root)	15.517
SRR2967015	Control (root)	16.021

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	116.822
SRR9715740	Leaf	156.752
SRR9715741	Leaf	93.649
SRR9715739	Root	8.244
SRR9715742	Root	10.314
SRR9715743	Root	8.354

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	13.146
SRR8749028	MeJA induced 9h	9.436
SRR8749029	MeJA induced 9h	9.940
SRR8749030	Uninduced	4.944
SRR8749031	Uninduced	0.958
SRR8749032	Uninduced	2.107

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	25.354
SRR8400027	Control - Root	26.168