Gene detail information of Glyur000330s00019523 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G14920.1 | 6.00E-22 | Gibberellin-regulated family protein |
| NR | AFK47972.1 | 1.24E-75 | unknown [Medicago truncatula] |
| Swissprot | tr|Q9LFR3|GASAE_ARATH | 4.00E-27 | Gibberellin-regulated protein 14 (Precursor) |
| trEMBL | tr|I3T630|I3T630_MEDTR | 5.00E-76 | Uncharacterized protein {ECO:0000313|EMBL:AFK47972.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00330 | 100541 | 102336 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000330s00019523.1 | PF02704.9 | GASA | 178 | 238 | 2.90E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 102.712 |
| SRR1783600 | control | 100.751 |
| SRR1783602 | moderate drought stress | 73.603 |
| SRR1811619 | moderate drought stress | 70.663 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 37.048 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 36.096 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.185 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.201 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.642 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.441 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 81.683 |
| SRR2868004 | Drought Stress (root) | 27.595 |
| SRR2967015 | Control (root) | 44.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.725 |
| SRR9715740 | Leaf | 0.051 |
| SRR9715741 | Leaf | 0.798 |
| SRR9715739 | Root | 66.718 |
| SRR9715742 | Root | 19.779 |
| SRR9715743 | Root | 26.871 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.182 |
| SRR8749028 | MeJA induced 9h | 0.121 |
| SRR8749029 | MeJA induced 9h | 0.129 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 95.828 |
| SRR8400027 | Control - Root | 96.458 |